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NECEvent2014_8_5_scaffold_2299_6

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(4188..4268)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator PspC n=1 Tax=Salmonella enterica subsp. enterica serovar Stanley str. ATCC 7308 RepID=V1MPT3_SALET similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 26.0
  • Bit_score: 55
  • Evalue 1.20e-05
Transcriptional regulator {ECO:0000313|EMBL:AIX54701.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae com UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 26.0
  • Bit_score: 55
  • Evalue 1.60e-05
phage shock protein C similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 26.0
  • Bit_score: 55
  • Evalue 3.70e-06

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Taxonomy

Enterobacter cloacae → Enterobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 81
GGGGAGAAGCGATTGCGCGAGATGGAACGTTATGTCACTTCCGATACTTTCACGTTACGTAGCCGTTTCCGTCAACTGTGA
PROTEIN sequence
Length: 27
GEKRLREMERYVTSDTFTLRSRFRQL*