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NECEvent2014_8_5_scaffold_1827_7

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(5123..5638)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein activator LpoB n=1 Tax=Escherichia coli UMEA 3318-1 RepID=T9JSX7_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 341
  • Evalue 4.00e-91
ycfM; fibronectin-binding protein B similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 341
  • Evalue 1.10e-91
Penicillin-binding protein activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889}; Short=PBP activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889};; Flags: Precursor;; TaxID=1444163 species="Bacteria; Proteobact similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 341
  • Evalue 5.60e-91

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
CAACAGCCTGTCCCCACAGTGCCCTCGGTGCCGACGATCCCGCAGCAGCCAGGCCCAATTGAGCACGAAGATCAAACTGCACCGCCTGCGCCGCATATTCGCCATTATGACTGGAATGGCGCAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTAGGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCATTGCCCGCAATGTCGGCGCTCATTACGTGCTGTACTCCAGCGCCTCTGGCAACGTTAACGCTCCGACCCTACAAATGCAGCTGATGCTGGTGCAGACGGGCGAAATTATCTGGTCAGGTAAAGGTGCCGTTTCGCAGCAATAA
PROTEIN sequence
Length: 172
QQPVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ*