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NECEvent2014_8_5_scaffold_5256_1

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 3..449

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance protein MdtB n=18 Tax=Escherichia coli RepID=M8VUK1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 281
  • Evalue 5.50e-73
multidrug efflux system subunit MdtB similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 281
  • Evalue 1.60e-73
Multidrug resistance protein MdtB {ECO:0000256|HAMAP-Rule:MF_01423, ECO:0000256|SAAS:SAAS00007778}; Multidrug transporter MdtB {ECO:0000256|HAMAP-Rule:MF_01423}; TaxID=766138 species="Bacteria; Proteo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 148.0
  • Bit_score: 281
  • Evalue 7.80e-73

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Taxonomy

Shigella boydii → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ACCATTCTCTCGACGCTACCCACCGCAGGAGTCGGCGCACTGCTGGCGTTAATGATTGCCGGTAGCGAACTGGATGTGATTGCGATTATCGGCATTATTTTGCTGATCGGTATCGTGAAGAAGAACGCCATCATGATGATCGACTTCGCGCTGGCTGCTGAGCGCGAGCAAGGCATGTCGCCGCGCGATGCCATCTACCAGGCTTGTCTGTTGCGTTTTCGTCCGATCCTGATGACCACTCTGGCGGCTCTGCTTGGCGCGCTGCCGCTGATGTTGAGTACCGGGGTCGGCGCGGAACTGCGTCGTCCGTTAGGTATCGGCATGGTCGGCGGCCTGATTGTCAGCCAGGTGCTGACGCTGTTTACCACGCCGGTGATTTATCTGCTGTTCGACCGCCTGGCATTGTGGACCAAAAGTCGCTTTGCTCGCCATGAAGAGGAGGCGTAA
PROTEIN sequence
Length: 149
TILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTKSRFARHEEEA*