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NECEvent2014_8_5_scaffold_2556_1

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(2..442)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transport system permease protein oppC n=1 Tax=Escherichia coli 179100 RepID=N3J054_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 147.0
  • Bit_score: 284
  • Evalue 8.40e-74
Oligopeptide transporter ABC transporter component similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 147.0
  • Bit_score: 284
  • Evalue 2.40e-74
Oligopeptide transport system permease protein oppC {ECO:0000313|EMBL:ADD56100.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 147.0
  • Bit_score: 284
  • Evalue 1.20e-73

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGATGTTAAGTAAGAAAAACAGCGAGACGCTGGAAAATTTTAGTGAAAAGCTGGAGGTCGAAGGGCGCAGCTTGTGGCAGGACGCACGTCGACGTTTTATGCATAACCGTGCGGCGGTTGCCAGTCTGATAGTGCTGGTGCTGATCGCGTTATTTGTAATCCTGGCACCGATGCTTTCCCAGTTTGCCTATGACGATACTGACTGGGCGATGATGTCCAGCGCCCCGGATATGGAGTCCGGTCACTACTTTGGTACTGACTCATCCGGTCGCGACCTGCTTGTGCGCGTTGCGATTGGCGGGCGTATCTCACTCATGGTCGGTGTTGCTGCGGCACTGGTGGCTGTGGTCGTCGGGACACTTTATGGTTCGCTTTCCGGTTATCTGGGCGGTAAAGTGGATTCGGTAATGATGCGTCTGCTGGAAATCCTCAACTCCTTC
PROTEIN sequence
Length: 147
MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSF