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NECEvent2014_8_5_scaffold_2706_3

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 2626..3468

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1269003 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 281.0
  • Bit_score: 570
  • Evalue 1.20e-159
Transcription-repair-coupling factor n=1 Tax=Escherichia coli UMEA 3201-1 RepID=T9B3V1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 281.0
  • Bit_score: 570
  • Evalue 8.60e-160
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 281.0
  • Bit_score: 570
  • Evalue 2.40e-160

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGCCCCCATATGTTGAGGCATATCCTAACGAGAATCTGACAACCGTTATGCCTGAACAATATCGTTATACGCTGCCCGTCAAAGCGGGTGAGCAGCGTCTGCTGGGCGAGTTAACCGGCGCAGCCTGTGCAACGCTGGTAGCGGAAATTGCCGAACGTCACGCCGGTCCGGTGGTACTCATTGCACCAGATATGCAAAATGCTCTGCGTTTGCATGATGAAATCAGCCAGTTTACCGATCAAATGGTGATGAATCTGGCGGACTGGGAAACTCTTCCCTACGACAGTTTTTCGCCTCATCAGGACATTATCTCCTCGCGCCTTTCCACCCTTTACCAGCTACCGACGATGCAGCGTGGCGTACTGATTGTTCCGGTGAATACGCTTATGCAGCGCGTTTGCCCACACAGTTTTCTCCACGGTCATGCGCTGGTGATGAAAAAAGGTCAGCGCCTGTCACGAGATGCATTACGAACCCAACTGGACAGCGCCGGTTATCGCCATGTTGACCAGGTGATGGAGCACGGCGAATACGCCACGCGCGGCGCGTTGCTGGATCTCTTCCCGATGGGGAGTGAGCTGCCTTATCGTCTTGATTTCTTTGATGATGAAATCGACAGCCTGCGGGTGTTTGACGTCGACAGCCAGCGCACGCTGGAGGAAGTAGAAGCGATCAATCTGCTGCCCGCGCACGAATTTCCGACCGATAAAGCGGCAATTGAACTGTTCCACAGCCAGTGGCGCGATACCTTCGAAGTGAAGCGCGATCCAGAACATATTTACCAGCAAGTGAGTAAAGGCACATTACCTGCCGGGATCGAGTACTGGCAGCCATTGTTCTTC
PROTEIN sequence
Length: 281
MPPYVEAYPNENLTTVMPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFHSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFF