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NECEvent2014_8_5_scaffold_4450_1

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(3..341)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein lom n=3 Tax=Enterobacteriaceae RepID=G2B8P3_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 235
  • Evalue 2.00e-59
Enterobacterial Ail/Lom family protein {ECO:0000313|EMBL:EIQ60881.1}; TaxID=766143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Sh similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 113.0
  • Bit_score: 235
  • Evalue 2.90e-59
enterobacterial Ail/Lom family protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 233
  • Evalue 2.80e-59

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Taxonomy

Shigella dysenteriae → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCGTAAATTATGTGCTGTTATTCTGTCCGCAGTAGTCTGGCTGGTTGCCGCTGGTATGCCAGCGAGCGCAGCAGAGCATCAGTCCACACTAAGCGCCGGGTATCTTCAGACCCATACTGATATGCCAGGCAGCGATGATCTGAACGGGATTAACGTGAAATACCGTTATGAGTTTACGGACACGCTGGGGCTGGTGACGTCATTCAGTTATGCCAATGCCAAAGATGAGCAAAAAACGCATTACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGCGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCG
PROTEIN sequence
Length: 113
MRKLCAVILSAVVWLVAAGMPASAAEHQSTLSAGYLQTHTDMPGSDDLNGINVKYRYEFTDTLGLVTSFSYANAKDEQKTHYSDTRWHEDSVRNRWFSVMAGPSVRVNEWFSA