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NECEvent2014_8_5_scaffold_5715_1

Organism: NECEvent2014_8_5_Escherichia_coli_50_14_partial

partial RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(278..1117)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator HdfR n=258 Tax=Enterobacteriaceae RepID=HDFR_ECO27 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 557
  • Evalue 5.80e-156
  • rbh
hdfR; transcriptional regulator HdfR similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 279.0
  • Bit_score: 556
  • Evalue 4.70e-156
HTH-type transcriptional regulator HdfR {ECO:0000256|HAMAP-Rule:MF_01233}; H-NS-dependent flhDC regulator {ECO:0000256|HAMAP-Rule:MF_01233}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaprote similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 279.0
  • Bit_score: 556
  • Evalue 2.40e-155

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGGATACGGAATTGTTAAAAACTTTCCTGGAAGTTAGCCGAACGCGTCACTTTGGTCGAGCGGCTGAATCGCTCTATCTGACCCAGTCAGCAGTGAGCTTTCGAATCAGACAACTGGAAAATCAACTGGGTGTGAACCTTTTCACCCGCCACAGAAACAATATCCGTTTAACCGCTGCCGGTGAAAAACTACTGCCTTATGCAGAAACGCTCATGAGCACCTGGCAGGCCGCCCGTAAGGAGGTGGCGCATACCTCACGACATAACGAGTTTTCTATCGGTGCCAGCGCCTCGTTGTGGGAATGTATGCTTAATCAGTGGCTGGGACGCTTGTATCAAAATCAGGATGCCCATACAGGCTTACAGTTCGAAGCGCGAATTGCCCAACGGCAGTCTCTGGTAAAACAGCTGCATGAACGCCAGCTTGATCTTCTTATTACCACTGAAGCGCCCAAAATGGACGAATTTAGTAGTCAGTTGCTGGGATATTTCACTTTAGCGCTTTATACCAGTGCCCCTTCAAAACTAAAGGGAGATCTTAATTATCTGCGACTTGAGTGGGGGCCAGATTTTCAACAGCATGAGGCAGGTTTGATCGGTGCTGACGAAGTGCCCATTCTGACAACCAGTTCTGCTGAACTGGCACAGCAACAGATTGCGATGCTTAATGGTTGCACCTGGCTACCCGTCAGCTGGGCGCGTAAAAAAGGCGGCCTGCATACCGTTGTCGATAGCACAACACTTTCACGGCCGCTTTATGCCATATGGCTGCAAAATAGCGATAAAAATGCGTTGATTCGCGATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAA
PROTEIN sequence
Length: 280
VDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY*