ggKbase home page

NECEvent2014_8_5_scaffold_4290_2

Organism: NECEvent2014_8_5_Klebsiella_pneumoniae-rel_56_245_partial

partial RP 28 / 55 MC: 5 BSCG 26 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(807..950)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=2 Tax=Yersinia enterocolitica subsp. enterocolitica RepID=A1JQY6_YERE8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 96
  • Evalue 1.10e-17
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 96
  • Evalue 3.00e-18
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 96
  • Evalue 1.50e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Erwinia typographi → Erwinia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 144
ATGAACACCGACCACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGTAAACTGCGCCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTCGACGATTAA
PROTEIN sequence
Length: 48
MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD*