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NECEvent2014_8_5_scaffold_1746_6

Organism: NECEvent2014_8_5_Enterobacter_cloacae-rel_56_185_partial

partial RP 25 / 55 MC: 2 BSCG 22 / 51 ASCG 10 / 38 MC: 3
Location: 3625..5565

Top 3 Functional Annotations

Value Algorithm Source
RNase E specificity factor CsrD n=2 Tax=Enterobacter cloacae complex RepID=V3MH52_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 646.0
  • Bit_score: 1267
  • Evalue 0.0
  • rbh
Regulatory protein CsrD {ECO:0000313|EMBL:KJP78499.1}; TaxID=61645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae com similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 646.0
  • Bit_score: 1267
  • Evalue 0.0
regulatory protein CsrD similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 646.0
  • Bit_score: 1249
  • Evalue 0.0

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Taxonomy

Enterobacter asburiae → Enterobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGCGATTAACGACGAAGTTCTCAGCTTTTATCACCTTGCTGACGGGGCTTACCATTTTTGTCACCCTTCTGGGCTGCTCTCTGAGCTTTTATAACGCCATTCAGGACAAACTGGTTAACCGGGTACAGTCTGTCGCGTCGGTAATTGATACGCGTCTGCTGACGACGCCGCTACCGGCACTCTCCAGGGAGCTCGATGAGTTGATGGTACCTGTTGATATTGTTCAGATCGACATTCAGCAGGGAAAGCATCGTGTGTTAAGCCACGAACGCCCGGGAAGCTATCGGCCTGCGGGCGTAGTGAGCCAGTATCGGGAAGTGACCGTACATTCCCTTAAAAATCCGGGGATGACCATACACATGGTCTATCTCGATCCGATGGCCAGCTATTTCCGTTCCATGATGACCACCGCGCCGCTCACCGTCGCGGTGGCGTTTATCGTCCTGCTGATCTTTCTCGCGGTCCGCTGGCTGCGCCGCCAGCTCTCCGGCCAGGAGCTGCTGGAGATGCGCTCCGTGCGGATCCTTAACGGTGAACGCGGCCCGCAGGTCCGTGGTTCAGTCCACGAATGGCCGTCACGCGCCAGCAGCGCGCTGGATACGCTGCTCTCGGAAATCCAGTTTGCCAGCGACCAGCGCAGCCGTATGGATACGCTGATCCGCTCCTATGCCGCGCAGGATAATAAAACCGGCCTCAACAACCGCCTTTTCTTTGATAATCAGCTCGCCACGCTGCTCGACGATTCGGAAAAAGTGGGGACGCACGGGGTGGTGATGATGATTCGCCTGCCTGATTTCGATCTCCTGCGCGACACCTGGGGACAGCGGGCCGCGGAAGAAAATCTCTTTACGCTGATCAACCTGCTCTCCACCTTTATTATGCGCTACCCGGGCGCGCTGCTGGCCCGCTACCACCGCAGCGACTTTGCCGTGTTGCTGCCGCATCGGACGCTGAAGGAGTCGGAAAGCATCGCCAGCCAGCTGCTGAAGGCGGTTGATGCGCTGCCGCAGAGCAAAATGCTCGACAGGGACGATATGGTCCACATGGGGATCTGCGCCTGGCGTGGCGGACAATCGACAGAACAGGTGATGGAGCATGCGGAAGCGGCCACCCGCAACGCCGTGCTGCAGGGCGCGAACGGATGGGCGGTCTATGATGATTCGCTGCCGGAAAAAGGGCGCGGTAACGTGCGCTGGCGTACGTTGATTGAGCAAATGCTAAGTCGCGGCGGACCGCGTATTTATCAAAAACCCGCGGTCATGAAAAACGGCAACGTTCATCACCGTGAACTGATGTGTCGTATTTTTGACGATACGGAAGAGGTTATTTCTGCGGAATATCTGCCAATGGTGCTGCAATTTGGGCTGTCCGAAGAGTATGACCGTCAGCAAATTAGCCGCTTGATTCCGTTTTTATCATTCTGGCCTGAAGAGAGCCTGGCGTTACAGGTCACCGTGGAGTCATTAATACGCCCGCGTTTTCAGCGCTGGCTGCGTGATACATTAATGCAATGCGAAAAATCGCAACGCAAACGCATTATTTTTGAACTTGCTGAGGCGGATGTAGGTCAACACATCAGCCGGTTACGTCCGGTGGTTCGTTTGATCAACGCGCTCGGCGCGCGCGTCGCGGTGACGCAGGCAGGTTTGACGCTGGTCAGCACCAACTGGATCAAGGAGCTGGATGTGGAGCTATTAAAGCTACATCCGGGGCTGGTAAGGAATATTGAAAAGCGCACGGAAAACCAGCTGCTGGTACAGAGCCTGGTTGAGGCGTGCAAAGGAACGCGAACACAGGTCTTTGCCGCGGGCGTGCGCGCCAGAGGCGAATGGCAAATGTTAACAGAGCGCGGTGTAATGGGTGGTCAGGGGGATTTTTTTGCTGCCTCTCAGCCGCTTGACACCAATGTGAAAAAATATTTGCAAAGATACTCGGTTTGA
PROTEIN sequence
Length: 647
MRLTTKFSAFITLLTGLTIFVTLLGCSLSFYNAIQDKLVNRVQSVASVIDTRLLTTPLPALSRELDELMVPVDIVQIDIQQGKHRVLSHERPGSYRPAGVVSQYREVTVHSLKNPGMTIHMVYLDPMASYFRSMMTTAPLTVAVAFIVLLIFLAVRWLRRQLSGQELLEMRSVRILNGERGPQVRGSVHEWPSRASSALDTLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDNQLATLLDDSEKVGTHGVVMMIRLPDFDLLRDTWGQRAAEENLFTLINLLSTFIMRYPGALLARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQSTEQVMEHAEAATRNAVLQGANGWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAVMKNGNVHHRELMCRIFDDTEEVISAEYLPMVLQFGLSEEYDRQQISRLIPFLSFWPEESLALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALGARVAVTQAGLTLVSTNWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTRTQVFAAGVRARGEWQMLTERGVMGGQGDFFAASQPLDTNVKKYLQRYSV*