Name | Group | Completeness | Size | %GC | Cov | # Contigs | # Genes | Max. Ctg. |
---|---|---|---|---|---|---|---|---|
NECEvent2014_8_6_UNK CURRENT |
n/a
|
partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38 | 166.00 Kbp | 39.27 % | 100.38 | 70 | 229 | 15353 |
Name | Taxonomy | Completeness | Size | % GC | Cov ⬇ | # Ctg | # Genes | Max ctg. |
---|---|---|---|---|---|---|---|---|
NECEvent2014_8_6_Klebsiella_pneumoniae-rel_57_348_partial
NECEvent2014_8_6_Klebsiella_57_365
Probably has low coverage minor strain resolvable by TS ESOM |
Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
partial RP 26 / 55 MC: 4 BSCG 22 / 51 ASCG 10 / 38 MC: 2 | 5.79 Mbp | 56.74 % | 364.80 | 546 | 6107 | 84101 |
NECEvent2014_8_6_Enterobacteriales_phage_51_55
NECEvent2014_8_6_Enterobacteriales_51_55
|
Phage
|
RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38 | 2.50 Kbp | 50.84 % | 54.96 | 1 | 5 | 2500 |
NECEvent2014_8_6_Enterobacter_cloacae-rel_55_31_partial
NECEvent2014_8_6_Enterobacter_56_34
|
Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
partial RP 26 / 55 MC: 7 BSCG 23 / 51 MC: 2 ASCG 12 / 38 MC: 1 | 5.17 Mbp | 55.55 % | 34.01 | 270 | 5191 | 152376 |
NECEvent2014_8_6_Escherichia_coli_51_30_partial
NECEvent2014_8_6_Escherichia_coli_51_31
|
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
partial RP 28 / 55 MC: 5 BSCG 23 / 51 MC: 1 ASCG 10 / 38 MC: 1 | 4.90 Mbp | 50.51 % | 31.13 | 251 | 4777 | 221452 |
NECEvent2014_8_6_Clostridium_butyricum_29_21
NECEvent2014_8_6_Clostridium_29_22
|
Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1 | 4.27 Mbp | 28.77 % | 22.36 | 693 | 4166 | 41036 |
NECEvent2014_8_6_Enterococcus_hirae-rel_37_6
NECEvent2014_8_6_Enterococcus_hirae_38_7
|
Enterococcus hirae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria
|
near complete RP 48 / 55 MC: 3 BSCG 48 / 51 ASCG 14 / 38 MC: 1 | 2.30 Mbp | 37.73 % | 6.55 | 703 | 2433 | 20420 |
NECEvent2014_8_6_Clostridium_perfringens_33_5_v_partial
NECEvent2014_8_6_Clostridium_perfringens_33_5
Mostly single copy genes |
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
partial RP 35 / 55 MC: 1 BSCG 34 / 51 ASCG 10 / 38 | 252.92 Kbp | 33.31 % | 5.11 | 175 | 293 | 6281 |
NECEvent2014_8_6_Streptococcus_HSISS3-rel_41_5
NECEvent2014_8_6_Streptococcus_41_5
May have other low abundance Strep species |
Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria
|
near complete RP 39 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 13 / 38 MC: 1 | 1.54 Mbp | 40.90 % | 5.06 | 678 | 1775 | 16221 |
NECEvent2014_8_6_Enterococcus_faecalis_rel_38_3_partial
NECEvent2014_8_6_Enterococcus_faecalis_39_4
|
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria
|
partial RP 14 / 55 MC: 2 BSCG 12 / 51 ASCG 3 / 38 | 616.98 Kbp | 38.96 % | 3.99 | 407 | 851 | 5316 |
NECEvent2014_8_6_Clostridium_35_4_v_partial
NECEvent2014_8_6_Clostridium_35_4
|
Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
partial RP 4 / 55 BSCG 4 / 51 ASCG 0 / 38 | 28.72 Kbp | 35.44 % | 3.92 | 24 | 41 | 2477 |
NECEvent2014_8_6_Enterobacteriales_53_3_hint
NECEvent2014_8_6_Enterobacteriales_53_3
ESOM area |
Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38 | 53.57 Kbp | 53.15 % | 3.35 | 44 | 83 | 2094 |