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NECEvent2014_8_7_scaffold_1422_3

Organism: NECEvent2014_8_7_Clostridium_butyricum_31_15

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 1
Location: comp(3343..4029)

Top 3 Functional Annotations

Value Algorithm Source
ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2) similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 229.0
  • Bit_score: 368
  • Evalue 2.00e-99
Ribosomal protein S1 n=2 Tax=Clostridium butyricum RepID=C4IE80_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 228.0
  • Bit_score: 435
  • Evalue 4.60e-119
  • rbh
SSU ribosomal protein S1p {ECO:0000313|EMBL:KJZ84432.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 228.0
  • Bit_score: 436
  • Evalue 1.70e-119

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
GAAATAGATGTTAAAATAACTGAATTAGATCTAAATAATAATAAAATTGTAGCATCTAGAAGAGTTATTGAAGAAGAAGAATATAACAAAAATAAAAAAGTAATATGGAACAGCTTACAAGAAGGTGAAAAGAGAACTGGAGTTGTTAAAAAGCTTGTTAAATTTGGAGCATTTGTAGATATCGGAGGAGTAGAAGGTTTAATTCATCTTTCGGATTTATCATGGGAAAGAGTAAATAAGCCAGAAGAGATCGTTAAAGAAGGGGATAAAGTTGAAGTATTTATTGGTAGTGTAGATAAGGAAAAGGAAAGACTATCTTTAATATTAAAGGATATTGCTAAAGAACCTTGGTCTGTTCATAGTGGAGAAATAAATGAAGGTGATGTTATAGAAGGAAAAGTTGTAAGACTTACTTCTTTTGGTGCCTTTGTAGAATTATTTGATGGTGTCGAAGGGCTTGTACACATAACTGAAATAACTGATGAAAATATTGCAAAACCTTCTGATGTTTTACAATTAAATCAAAAGGTAAAAGTTAAAGTGTTAAGTATAGATAGGGAAAATAAGAAAATGTCTTTAAGTATAAAAGATGCTGTTGAAAGTAGTAAGGAATATCTTGAATATGTAGATAATGAAGAAGAGGGAACTTCTTTGGCAGATTTACTTAAAGGATTCAAATTTAATTAG
PROTEIN sequence
Length: 229
EIDVKITELDLNNNKIVASRRVIEEEEYNKNKKVIWNSLQEGEKRTGVVKKLVKFGAFVDIGGVEGLIHLSDLSWERVNKPEEIVKEGDKVEVFIGSVDKEKERLSLILKDIAKEPWSVHSGEINEGDVIEGKVVRLTSFGAFVELFDGVEGLVHITEITDENIAKPSDVLQLNQKVKVKVLSIDRENKKMSLSIKDAVESSKEYLEYVDNEEEGTSLADLLKGFKFN*