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NECEvent2014_8_7_scaffold_2339_1

Organism: NECEvent2014_8_7_Clostridium_butyricum_31_15

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 1
Location: 3..1640

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4M3_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 545.0
  • Bit_score: 1056
  • Evalue 0.0
  • rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ96703.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 545.0
  • Bit_score: 1056
  • Evalue 0.0
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 549.0
  • Bit_score: 741
  • Evalue 1.60e-211

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Taxonomy

Clostridium sp. IBUN22A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1638
TTAATGGGACCTTATTTTGTAAAGATTGCTATGGATGAAAGTATTCCTAATAAAGATATGAATGGACTTATTTTTATAAGTATATTATTTGTTGCTACAATTATAATAAGTTCAGTATGTATGAAATATAAGATAAAAACAATGACATTAGTTGGACAATCTATCATAAAAAATATAAGATCAGATTTATTTAATCATCTGCAAAAACTTCCATTTTCATATTATGATAGCAGACCTCATGGGAAGATACTTGTAAGAGTTGTTAATTATGTGAATTCATTAAGTGATTTATTATCAAATGGATTAATTAATATGATCACTGATTTATTTAGTATTTTTGTAATAATTGGATTTATGTTATTTATAAGTCCAAAACTTACATTAATATGTCTCATTGGAATGCCAGTTTTATGTTTAGTAGTAGCCATGCTTGCAAAAGTTCAGAGAATAACAACACAGAAATATAGCAATAAGCAATCAAATTTAAATGCTTACATTCAGGAAAGTATAAGTGGAATGAAAGTAACTCAGGCATTTGCAAGAGAAAATGTCAATGCACAAAAGTTTAGAACGGTAAGTGGGGAAAATAGAAGTACCTGGCTTACAGCTGTAAAATATCAGCTTATGTTATGGCCTGCAATTGATAATATTTCAGTTTTTACTGTATCCCTTGTATATTTAGTGGGTATAAAATCCATTGGAGTAGACATATCAGTAGGTACATTAGTCGCTTTTGTAGGGTATATATGGAGATTCTGGAATCCTATAGTTAATATATCAAATTTCTATAATACATTAATTATGGCAATGGCATATTTAGAGAGAATATTTGAAACTCTTGATGAAGAAGTAAGCATAACGAATTTAAGAGATGCTTATGAAATGCCAGAAGTTAAAGGTGATGTAGAGTTTAAAGATGTAGTTTTCAAATATGAGGATGAAGATAGGGAAATATTGAAGAATGTATCATTTAAAGTGAACGCTGGAGAGACGATAGCTTTAGTAGGACCTACAGGAGCAGGAAAAACTACAATAATAAATCTTTTAAGCAGATTTTACGATGTGACAAAAGGCGAGGTTAGAATAGACGATAATGATATTAGAAAAGTAACACTTAACTCTTTAAGGGAACAGATGGGAGTAATGCTTCAAGATACATTTATATTTTCAGGAACTATATTAGACAATATAAGATATGGGAATTTAAATGCAACTGAAGATGAGATTGTTAATGCAGCAAAAGCTGTAAGAGCTCATGAATTTATTATGAATTTAAAAGATGGATATAATACTCAGGTAAATGAAAGAGGAAGCAGATTATCAGTAGGGCAGAGACAACTTATATCATTTGCAAGAGCACTGCTTGCAGATCCGAAAATATTAATTTTAGATGAAGCTACTTCAAGCATAGATACTCAGACAGAAAAATCACTTCAGGAAGGGTTGAACAAGCTATTAAATGGAAGAACATCATTTGTAATTGCTCATAGATTATCAACTATAAAAAATGCAGATAGAATAATGGTTATAAATGATGGAAAGATAGCTGAAATTGGTACTCATGATGAATTAGTGAAAAAACGTGGTGAATATTACGATTTGTATAGAGCACAGTATGAAATTATGAATGCTGTTTAA
PROTEIN sequence
Length: 546
LMGPYFVKIAMDESIPNKDMNGLIFISILFVATIIISSVCMKYKIKTMTLVGQSIIKNIRSDLFNHLQKLPFSYYDSRPHGKILVRVVNYVNSLSDLLSNGLINMITDLFSIFVIIGFMLFISPKLTLICLIGMPVLCLVVAMLAKVQRITTQKYSNKQSNLNAYIQESISGMKVTQAFARENVNAQKFRTVSGENRSTWLTAVKYQLMLWPAIDNISVFTVSLVYLVGIKSIGVDISVGTLVAFVGYIWRFWNPIVNISNFYNTLIMAMAYLERIFETLDEEVSITNLRDAYEMPEVKGDVEFKDVVFKYEDEDREILKNVSFKVNAGETIALVGPTGAGKTTIINLLSRFYDVTKGEVRIDDNDIRKVTLNSLREQMGVMLQDTFIFSGTILDNIRYGNLNATEDEIVNAAKAVRAHEFIMNLKDGYNTQVNERGSRLSVGQRQLISFARALLADPKILILDEATSSIDTQTEKSLQEGLNKLLNGRTSFVIAHRLSTIKNADRIMVINDGKIAEIGTHDELVKKRGEYYDLYRAQYEIMNAV*