ggKbase home page

NECEvent2014_8_7_scaffold_3337_1

Organism: NECEvent2014_8_7_Clostridium_butyricum_31_15

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 1
Location: 3..1769

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1523156 species="Bacteria; Firmicutes; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 572.0
  • Bit_score: 1077
  • Evalue 0.0
rnr; ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 565.0
  • Bit_score: 945
  • Evalue 1.00e-272
Ribonuclease R n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3D8_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 572.0
  • Bit_score: 1077
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1767
CAAAGAATTCAAAATGATATATTCATATCTAAGAAGGATAGAAATGGAGCTAAAAAAGGTAATGTAGTTGTTGTTGAAATAACTAAGTGGCCAGATGGTAGAAGAAAGAATCCAGAAGGAGTAGTAGTAGAAATACTAGGAAACAGAGGAGATTTAGGCTTAGATATTATAACTGTAATTAAGAAATATGCTCTTCCAGAAGAATTCCCTCCACAAGTTTTAGCCTTTGCAGAAGAAATTTCAGAGGAAATCCCAGAGTCAGAAATTAAGAGAAGAACAGACTTAAGAGATGTAAAAATGGTTACTATAGATGGTGAAGATGCTAAGGATTTAGATGATGCTGTATCTATAGAAAAACTACCTAATGGAAATTATAAATTAGGAGTTCACATTGCGGACGTTTCTCACTATGTACGTGAAAATAATCCTCTTGATAAAGAAGCATTTAAAAGAGCAACTTCAGTATATTTAATAGACAGGGTTATTCCAATGCTTCCTAGAAAATTATCTAATGGAATATGTTCATTAAATCCTAAAGTTGATAGACTAACTTTATCATGTATAATGGAAATAGATCATAAAGGAAAAGTTGTTAATCATGAAATAGTTGAATCTGTAATAAGAACTAATGAAAGAATGACATATACAGATGTAACTAAGATTTTAGAAGATAATGATGAAGAGTTAATTAAGAGATACGATTATCTTGTTGATGACTTTAAAACAATGAAAGAGCTTTGTAAAATATTAAGAGCAAAGAGAACCAAAAGGGGAGCTATTGATTTTGAAATAGCTGAAGCTAAAATAATATTAAATGAACTTGGAAAACCAATAGAAATAAAGCCTTATGATAGAGCTATATCTAATAGAATGATTGAAGAATTTATGCTTGTAGCAAATGAAACTGTGGCAGAGCATATGTTCTGGACACATTTACCTTTTGTATATAGAATTCATGAAAATCCTGATGATGAAAAATTAACTAAGTTCAAAGAATTTATTCATAATTTAGGATACAATATTAATTGGACTGAAGAAATAAGACCGAAGACACTTCAAGATATAATAGAAAAGGTAAAGGGTAAGAGTGAAGAAACAGTAGTAAATACTTTATTATTACGTTCAATGATGCAAGCAAGGTATGCACCAGAATGTACTGGTCACTTTGGATTAGCAGCACAATATTATTGTCACTTTACTTCGCCAATAAGAAGATATCCTGATTTACAAATTCACAGAATAATTAAAGAATATCTTCATGGAAAAATAGATGAAAAGAGAGAAAATAAATTAAAGAATATTGTTGGTCACTCAGCAAAACAGTCATCAGAAATGGAAAGAAAAGCTCAAGATGCAGAAAGAGAAGTTGATGATTTAAAGAAAGCTGAATATATGCAGGATAGAATTGGAGAAGAATTTGAAGGTGTTATTTCTTCTGTAACATCATTTGGAGTCTTTGTGGAACTTCCAAGTACAATAGAAGGTTTAGTTCATATTACAGATTTAGATGATGATTACTATATTTATGAAGAAGATCATTTAAGATTAATCGGTGAGAGAACTAAGAAAATCTATAAACTTGGAGATAAAGTACTTGTAGAGTGTGTTCATGTTGATATGCCAAATAAAGAAATATTCTTTAAGATTATTGAAGAACCAAATGAAGAAGAAGTTTCAGTAGAAGAACCTAAAAATAATGAGAGCGAAATTGAAATTAAATGAAAGAGAATGGTTTATGATAGAAAATCTTTAAGAAGCAAAAAATAG
PROTEIN sequence
Length: 589
QRIQNDIFISKKDRNGAKKGNVVVVEITKWPDGRRKNPEGVVVEILGNRGDLGLDIITVIKKYALPEEFPPQVLAFAEEISEEIPESEIKRRTDLRDVKMVTIDGEDAKDLDDAVSIEKLPNGNYKLGVHIADVSHYVRENNPLDKEAFKRATSVYLIDRVIPMLPRKLSNGICSLNPKVDRLTLSCIMEIDHKGKVVNHEIVESVIRTNERMTYTDVTKILEDNDEELIKRYDYLVDDFKTMKELCKILRAKRTKRGAIDFEIAEAKIILNELGKPIEIKPYDRAISNRMIEEFMLVANETVAEHMFWTHLPFVYRIHENPDDEKLTKFKEFIHNLGYNINWTEEIRPKTLQDIIEKVKGKSEETVVNTLLLRSMMQARYAPECTGHFGLAAQYYCHFTSPIRRYPDLQIHRIIKEYLHGKIDEKRENKLKNIVGHSAKQSSEMERKAQDAEREVDDLKKAEYMQDRIGEEFEGVISSVTSFGVFVELPSTIEGLVHITDLDDDYYIYEEDHLRLIGERTKKIYKLGDKVLVECVHVDMPNKEIFFKIIEEPNEEEVSVEEPKNNESEIEIK*KRMVYDRKSLRSKK*