ggKbase home page

NECEvent2014_8_7_scaffold_6414_2

Organism: NECEvent2014_8_7_Clostridium_butyricum_31_15

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 3 ASCG 16 / 38 MC: 1
Location: comp(461..1057)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein VanR n=2 Tax=Clostridium butyricum RepID=M8JHZ8_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 399
  • Evalue 1.40e-108
  • rbh
DNA-binding response regulator {ECO:0000313|EMBL:KJZ84455.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 198.0
  • Bit_score: 399
  • Evalue 2.00e-108
gtcR; response regulator GtcR similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 197.0
  • Bit_score: 328
  • Evalue 1.50e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 597
AAAGAAGCTTTAGATATTTTTGAATGTGAAAAAATAGATTTAATATTAGTTGATATAATGATGCCTAAAATTAATGGAATTGCAGTTATACAGAAGGTGAGAGAGAGTTCTACTATACCAATAATATGCATTACAGCAATGGGAAGTGATTCAGATAAAGTACTTGCGCTAGGAATAGGTGCTGATGACTATTTAGTTAAACCCATAAGTCCTATAGAATTATGTGCAAGGGTATCATCTCATCTTAGAAGATGTTATAGGTATACTGAAAATAGGGAAGATACCTGTTCTACTGGAGATTTAAAAATATATTCAGACACCTTTGAAGTTTACAAAGGAGATAAAAAGATAGAGTTAAATCCTAAGGAATTTAAAATACTTAAATTATTAATATCAAATGCGGGACGAGTTTTTACAAAGAAACAAATTTATGAGCAAGTATGGGGTGAGATTTATATTGGAGATTCAAACAATATAATGGTTCATTTAAGTCATATAAGAGAAAAGATAGAAGATGATCCTAAGAATCCAGTGTATATAAAAACTATAAGAGGAATAGGGTATAAGATTGAAAGGTATAAGCCTAATGAAATCTAA
PROTEIN sequence
Length: 199
KEALDIFECEKIDLILVDIMMPKINGIAVIQKVRESSTIPIICITAMGSDSDKVLALGIGADDYLVKPISPIELCARVSSHLRRCYRYTENREDTCSTGDLKIYSDTFEVYKGDKKIELNPKEFKILKLLISNAGRVFTKKQIYEQVWGEIYIGDSNNIMVHLSHIREKIEDDPKNPVYIKTIRGIGYKIERYKPNEI*