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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1051-1100 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_2762 178_007_scaffold_2762
Species: Clostridium butyricum (50%)
2 2145 bp 32.31 14.97 84.34
NECEvent2014_8_7_scaffold_3299 178_007_scaffold_3299
Species: Clostridium sp. IBUN125C (50%)
2 1854 bp 30.26 14.97 86.89
NECEvent2014_8_7_scaffold_2300 178_007_scaffold_2300
Species: Clostridium butyricum (100%)
2 2543 bp 31.46 14.98 84.59
NECEvent2014_8_7_scaffold_927 178_007_scaffold_927
Species: Clostridium sp. IBUN125C (60%)
5 5848 bp 32.58 14.98 94.39
NECEvent2014_8_7_scaffold_962 178_007_scaffold_962
Species: Clostridium butyricum (100%)
5 5711 bp 32.52 15.02 93.35
NECEvent2014_8_7_scaffold_3290 178_007_scaffold_3290
Species: Clostridium butyricum (100%)
2 1857 bp 28.76 15.02 92.41
NECEvent2014_8_7_scaffold_3215 178_007_scaffold_3215
Species: Clostridium sp. IBUN13A (50%)
2 1896 bp 30.59 15.03 88.13
NECEvent2014_8_7_scaffold_1009 178_007_scaffold_1009
Species: Clostridium sp. IBUN125C (100%)
4 5404 bp 30.55 15.04 95.32
NECEvent2014_8_7_scaffold_2935 178_007_scaffold_2935
Species: Clostridium butyricum (50%)
2 2035 bp 29.29 15.04 89.78
NECEvent2014_8_7_scaffold_2169 178_007_scaffold_2169
Species: Clostridium butyricum (100%)
2 2701 bp 29.91 15.11 89.97
NECEvent2014_8_7_scaffold_2706 178_007_scaffold_2706
Species: Clostridium butyricum (100%)
1 2184 bp 29.99 15.11 83.65
NECEvent2014_8_7_scaffold_875 178_007_scaffold_875
Genus: Clostridium (100%)
7 6092 bp 30.96 15.12 82.73
NECEvent2014_8_7_scaffold_2338 178_007_scaffold_2338
Species: Clostridium sp. IBUN22A (50%)
2 2494 bp 33.72 15.16 84.20
NECEvent2014_8_7_scaffold_563 178_007_scaffold_563
Species: Clostridium butyricum (66.67%)
6 8636 bp 31.98 15.18 91.71
NECEvent2014_8_7_scaffold_1102 178_007_scaffold_1102
Species: Clostridium butyricum (50%)
2 4957 bp 30.06 15.19 90.48
NECEvent2014_8_7_scaffold_2719 178_007_scaffold_2719
Species: Clostridium butyricum (50%)
2 2173 bp 32.44 15.19 95.12
NECEvent2014_8_7_scaffold_2769 178_007_scaffold_2769
Genus: Clostridium (100%)
3 2143 bp 27.62 15.19 67.90
NECEvent2014_8_7_scaffold_2280 178_007_scaffold_2280
Species: Clostridium butyricum (100%)
1 2563 bp 32.31 15.22 98.32
NECEvent2014_8_7_scaffold_1307 178_007_scaffold_1307
Species: Clostridium sp. IBUN125C (50%)
4 4322 bp 29.52 15.24 87.95
NECEvent2014_8_7_scaffold_2334 178_007_scaffold_2334
Species: Clostridium sp. IBUN125C (66.67%)
3 2500 bp 30.52 15.24 88.92
NECEvent2014_8_7_scaffold_2883 178_007_scaffold_2883
Species: Clostridium butyricum (50%)
4 2074 bp 31.20 15.26 92.14
NECEvent2014_8_7_scaffold_3804 178_007_scaffold_3804
Genus: Clostridium (100%)
3 1637 bp 31.34 15.30 82.10
NECEvent2014_8_7_scaffold_2783 178_007_scaffold_2783
Species: Clostridium butyricum (100%)
2 2136 bp 31.84 15.31 75.56
NECEvent2014_8_7_scaffold_4202 178_007_scaffold_4202
Species: Clostridium butyricum (100%)
2 1506 bp 31.21 15.34 96.61
NECEvent2014_8_7_scaffold_751 178_007_scaffold_751
Species: Clostridium butyricum (57.14%)
7 7034 bp 30.85 15.35 90.29
NECEvent2014_8_7_scaffold_2886 178_007_scaffold_2886
Species: Clostridium butyricum (100%)
1 2071 bp 31.00 15.35 99.81
NECEvent2014_8_7_scaffold_4349 178_007_scaffold_4349
Species: Clostridium sp. IBUN13A (50%)
2 1465 bp 29.35 15.36 92.76
NECEvent2014_8_7_scaffold_2657 178_007_scaffold_2657
Species: Clostridium sp. IBUN125C (50%)
2 2217 bp 31.08 15.36 89.17
NECEvent2014_8_7_scaffold_2551 178_007_scaffold_2551
Species: Clostridium sp. IBUN125C (100%)
2 2303 bp 30.22 15.37 84.93
NECEvent2014_8_7_scaffold_2641 178_007_scaffold_2641
Species: Clostridium butyricum (50%)
2 2233 bp 31.66 15.38 88.80
NECEvent2014_8_7_scaffold_1769 178_007_scaffold_1769
Species: Clostridium butyricum (66.67%)
3 3255 bp 31.67 15.39 87.37
NECEvent2014_8_7_scaffold_1034 178_007_scaffold_1034
Species: Clostridium butyricum (75%)
4 5275 bp 30.22 15.41 88.38
NECEvent2014_8_7_scaffold_1438 178_007_scaffold_1438
Species: Clostridium sp. IBUN22A (50%)
4 3960 bp 30.38 15.42 93.48
NECEvent2014_8_7_scaffold_3287 178_007_scaffold_3287
Genus: Clostridium (66.67%)
3 1858 bp 32.40 15.42 82.02
NECEvent2014_8_7_scaffold_2713 178_007_scaffold_2713
Species: Clostridium butyricum (66.67%)
3 2178 bp 29.02 15.43 86.91
NECEvent2014_8_7_scaffold_6631 178_007_scaffold_6631
Species: Clostridium butyricum (50%)
2 1030 bp 28.74 15.44 79.22
NECEvent2014_8_7_scaffold_1611 178_007_scaffold_1611
Genus: Clostridium (100%)
3 3553 bp 30.90 15.45 96.93
NECEvent2014_8_7_scaffold_759 178_007_scaffold_759
Species: Clostridium sp. IBUN125C (100%)
3 6957 bp 32.11 15.48 91.25
NECEvent2014_8_7_scaffold_6650 178_007_scaffold_6650
Species: Clostridium butyricum (100%)
1 1027 bp 27.56 15.48 74.78
NECEvent2014_8_7_scaffold_718 178_007_scaffold_718
Species: Clostridium butyricum (85.71%)
7 7307 bp 33.01 15.48 98.21
NECEvent2014_8_7_scaffold_1482 178_007_scaffold_1482
Species: Clostridium butyricum (50%)
6 3864 bp 31.68 15.53 84.86
NECEvent2014_8_7_scaffold_3083 178_007_scaffold_3083
Species: Clostridium butyricum (50%)
2 1969 bp 32.15 15.54 98.73
NECEvent2014_8_7_scaffold_2688 178_007_scaffold_2688
Species: Clostridium butyricum (100%)
4 2198 bp 30.48 15.56 81.62
NECEvent2014_8_7_scaffold_1136 178_007_scaffold_1136
Species: Clostridium butyricum (75%)
4 4862 bp 31.02 15.58 90.52
NECEvent2014_8_7_scaffold_2231 178_007_scaffold_2231
Genus: Clostridium (100%)
3 2611 bp 31.98 15.63 98.81
NECEvent2014_8_7_scaffold_3307 178_007_scaffold_3307
Species: Clostridium sp. IBUN22A (50%)
2 1851 bp 31.06 15.64 93.03
NECEvent2014_8_7_scaffold_2317 178_007_scaffold_2317
Genus: Clostridium (100%)
3 2521 bp 30.50 15.65 76.99
NECEvent2014_8_7_scaffold_3767 178_007_scaffold_3767
Species: Clostridium butyricum (50%)
2 1649 bp 31.53 15.65 89.33
NECEvent2014_8_7_scaffold_4642 178_007_scaffold_4642
Species: Clostridium butyricum (100%)
1 1387 bp 31.22 15.68 91.06
NECEvent2014_8_7_scaffold_1628 178_007_scaffold_1628
Species: Clostridium butyricum (50%)
2 3532 bp 30.27 15.71 84.09
Displaying items 1051-1100 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.