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NECEvent2014_8_7_Clostridium_butyricum_31_15

NECEvent2014_8_7_Clostridium_30_12
In projects: NECEvent2014_8_7

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 251-300 of 1237 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_7_scaffold_4049 178_007_scaffold_4049
Species: Clostridium butyricum (50%)
2 1547 bp 29.99 13.96 90.56
NECEvent2014_8_7_scaffold_1398 178_007_scaffold_1398
Species: Clostridium sp. IBUN125C (66.67%)
3 4097 bp 31.00 13.95 91.82
NECEvent2014_8_7_scaffold_725 178_007_scaffold_725
Species: Clostridium butyricum (50%)
6 7268 bp 31.41 13.95 89.16
NECEvent2014_8_7_scaffold_729 178_007_scaffold_729
Species: Clostridium sp. IBUN13A (75%)
4 7214 bp 30.52 13.95 96.98
NECEvent2014_8_7_scaffold_2109 178_007_scaffold_2109
Species: Clostridium sp. IBUN125C (66.67%)
3 2782 bp 30.34 13.91 85.62
NECEvent2014_8_7_scaffold_1911 178_007_scaffold_1911
Species: Clostridium butyricum (50%)
2 3067 bp 31.72 13.89 94.00
NECEvent2014_8_7_scaffold_2646 178_007_scaffold_2646
Species: Clostridium sp. IBUN13A (100%)
1 2226 bp 29.83 13.88 88.54
NECEvent2014_8_7_scaffold_2978 178_007_scaffold_2978
Species: Clostridium sp. IBUN22A (50%)
2 2011 bp 28.69 13.87 85.03
NECEvent2014_8_7_scaffold_1682 178_007_scaffold_1682
Species: Clostridium butyricum (66.67%)
3 3423 bp 29.59 13.85 85.80
NECEvent2014_8_7_scaffold_4005 178_007_scaffold_4005
Species: Clostridium sp. IBUN13A (100%)
1 1560 bp 33.59 13.85 89.42
NECEvent2014_8_7_scaffold_1178 178_007_scaffold_1178
Genus: Clostridium (100%)
5 4730 bp 32.11 13.83 90.63
NECEvent2014_8_7_scaffold_1210 178_007_scaffold_1210
Species: Clostridium sp. IBUN125C (60%)
5 4624 bp 29.82 13.82 89.99
NECEvent2014_8_7_scaffold_3123 178_007_scaffold_3123
Species: Clostridium sp. IBUN125C (50%)
2 1946 bp 32.53 13.80 95.27
NECEvent2014_8_7_scaffold_2089 178_007_scaffold_2089
Species: Clostridium butyricum (100%)
3 2801 bp 31.42 13.76 99.50
NECEvent2014_8_7_scaffold_2569 178_007_scaffold_2569
Genus: Clostridium (100%)
3 2291 bp 30.42 13.75 89.18
NECEvent2014_8_7_scaffold_1269 178_007_scaffold_1269
Species: Clostridium sp. IBUN125C (60%)
5 4432 bp 29.92 13.74 89.49
NECEvent2014_8_7_scaffold_768 178_007_scaffold_768
Genus: Clostridium (100%)
6 6877 bp 32.59 13.74 97.98
NECEvent2014_8_7_scaffold_1603 178_007_scaffold_1603
Species: Clostridium sp. IBUN125C (50%)
4 3585 bp 29.79 13.72 71.88
NECEvent2014_8_7_scaffold_1654 178_007_scaffold_1654
Species: Clostridium sp. IBUN125C (60%)
5 3476 bp 30.18 13.72 97.87
NECEvent2014_8_7_scaffold_3205 178_007_scaffold_3205 3 1902 bp 29.55 13.72 87.22
NECEvent2014_8_7_scaffold_4722 178_007_scaffold_4722
Species: Clostridium butyricum (50%)
4 1369 bp 31.56 13.70 83.35
NECEvent2014_8_7_scaffold_2208 178_007_scaffold_2208
Species: Clostridium sp. IBUN125C (50%)
4 2650 bp 29.77 13.70 89.21
NECEvent2014_8_7_scaffold_4415 178_007_scaffold_4415
Species: Clostridium butyricum (50%)
2 1446 bp 29.74 13.69 86.10
NECEvent2014_8_7_scaffold_1909 178_007_scaffold_1909
Species: Clostridium sp. IBUN125C (50%)
2 3068 bp 29.89 13.69 97.29
NECEvent2014_8_7_scaffold_2068 178_007_scaffold_2068
Species: Clostridium butyricum (100%)
3 2828 bp 31.93 13.63 96.96
NECEvent2014_8_7_scaffold_1675 178_007_scaffold_1675
Species: Clostridium sp. IBUN125C (100%)
1 3433 bp 31.81 13.63 98.31
NECEvent2014_8_7_scaffold_495 178_007_scaffold_495
Species: Clostridium sp. IBUN125C (100%)
1 9476 bp 30.36 13.61 99.98
NECEvent2014_8_7_scaffold_3569 178_007_scaffold_3569
Species: Clostridium butyricum (100%)
1 1730 bp 33.06 13.61 82.89
NECEvent2014_8_7_scaffold_2065 178_007_scaffold_2065
Species: Clostridium sp. IBUN125C (100%)
2 2832 bp 30.37 13.56 92.37
NECEvent2014_8_7_scaffold_2896 178_007_scaffold_2896
Species: Clostridium sp. IBUN125C (100%)
1 2062 bp 30.70 13.53 85.40
NECEvent2014_8_7_scaffold_2165 178_007_scaffold_2165
Species: Clostridium butyricum (66.67%)
3 2708 bp 30.76 13.52 98.04
NECEvent2014_8_7_scaffold_3397 178_007_scaffold_3397
Species: Clostridium sp. IBUN125C (50%)
2 1799 bp 29.68 13.51 86.71
NECEvent2014_8_7_scaffold_2501 178_007_scaffold_2501
Species: Clostridium butyricum (50%)
2 2343 bp 27.44 13.51 74.39
NECEvent2014_8_7_scaffold_1015 178_007_scaffold_1015
Species: Clostridium sp. IBUN13A (80%)
5 5380 bp 32.27 13.49 95.13
NECEvent2014_8_7_scaffold_2269 178_007_scaffold_2269
Species: Clostridium butyricum (100%)
3 2579 bp 30.94 13.49 95.97
NECEvent2014_8_7_scaffold_2362 178_007_scaffold_2362
Species: Clostridium butyricum (60%)
5 2470 bp 30.85 13.48 77.13
NECEvent2014_8_7_scaffold_1918 178_007_scaffold_1918
Species: Clostridium sp. IBUN13A (50%)
2 3060 bp 30.10 13.48 97.75
NECEvent2014_8_7_scaffold_2946 178_007_scaffold_2946
Species: Clostridium sp. IBUN13A (100%)
1 2028 bp 29.44 13.46 94.23
NECEvent2014_8_7_scaffold_677 178_007_scaffold_677
Species: Clostridium butyricum (85.71%)
7 7647 bp 31.29 13.46 92.59
NECEvent2014_8_7_scaffold_878 178_007_scaffold_878
Species: Clostridium sp. IBUN125C (60%)
5 6057 bp 30.49 13.45 90.84
NECEvent2014_8_7_scaffold_2081 178_007_scaffold_2081
Species: Clostridium butyricum (100%)
1 2812 bp 29.73 13.44 79.59
NECEvent2014_8_7_scaffold_1719 178_007_scaffold_1719
Species: Clostridium butyricum (75%)
4 3350 bp 29.61 13.43 90.90
NECEvent2014_8_7_scaffold_1079 178_007_scaffold_1079
Species: Clostridium butyricum (60%)
5 5052 bp 30.07 13.42 87.71
NECEvent2014_8_7_scaffold_1915 178_007_scaffold_1915
Species: Clostridium sp. IBUN125C (50%)
2 3064 bp 30.06 13.41 64.43
NECEvent2014_8_7_scaffold_2410 178_007_scaffold_2410
Species: Clostridium butyricum (50%)
2 2420 bp 30.54 13.39 91.98
NECEvent2014_8_7_scaffold_1619 178_007_scaffold_1619
Species: Clostridium sp. IBUN125C (50%)
4 3543 bp 29.72 13.38 98.14
NECEvent2014_8_7_scaffold_1811 178_007_scaffold_1811
Species: Clostridium butyricum (100%)
2 3186 bp 30.89 13.37 94.92
NECEvent2014_8_7_scaffold_5534 178_007_scaffold_5534
Species: Clostridium sp. IBUN125C (100%)
1 1191 bp 29.14 13.35 81.86
NECEvent2014_8_7_scaffold_4200 178_007_scaffold_4200
Species: Clostridium sp. IBUN125C (50%)
2 1507 bp 29.93 13.34 94.76
NECEvent2014_8_7_scaffold_550 178_007_scaffold_550
Species: Clostridium butyricum (50%)
12 8763 bp 30.17 13.33 87.20
Displaying items 251-300 of 1237 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.