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NECEvent2014_8_7_scaffold_5773_1

Organism: NECEvent2014_8_7_Clostridium_perfringens_32_6_partial

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: 94..1149

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 697
  • Evalue 2.20e-198
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 697
  • Evalue 1.10e-197
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7S9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 352.0
  • Bit_score: 697
  • Evalue 7.70e-198

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGTACATCCTGTCCAAGTTGGAAAAAGAACGAGAATGAGCTTTGCAAAAGTCAAAGACGTGGCTGAAATGCCAAACCTAATTGAAATTCAATTAGATTCTTACAAATGGTTTTTAGATGCAGGACTTTATGAAGTTTTTGATGATATTAATCCTATCTCAAACTTTACTGGAAATCTTGTACTTGAGTTTGTAGGGTACACTCTAGATATGGATAACATAAAATATTCAGTTGAAGAGTGTAAAGAAAGAGACACTACTTATGCTGCACCGCTAAAAGTAGCTGTAAGACTTCAAAACAAAGAAACTGGAGAAATAAAAGAACAAGAGGTATTTATGGGAGATTTCCCATTAATGACAGAGCAAGGAACTTTTATAATCAATGGTGCCGAAAGAGTTATTGTTTCTCAGTTAGTAAGATCACCAGGTGTTTACTACAATTATAATGTAGATAAAACTGGTAAAAAACTGTTCTCTGCAACAGTAATACCTAACAGAGGTGCATGGTTAGAGTATGAAACAGATTCAAATGATGTTATCTATGTAAGAATAGATAAAACAAGAAAACTTCCTATAAGTATACTAGGAAGAGCTATGGGCTTTGGAAGCGATCAAGAACTTCTTGAGTATTTTGGTGAAGAAGAAAGATTCAAAGCTACAATAGAAAAAGATAATACTAAGACTAAAGAAGAAGCATTATTAGAAATATATAAGAGATTAAGACCAGGTGAACCACCTACAGTTGATAGTGCAATTAGTTTAATAGATTCTCTATTCTTCGATGCTAAGAGATACGACTTATCAAGAGTTGGTAGATACAAGTTTAACAAAAAACTTGCAATTGGTTTAAGAATAGCTAACCAAATAGCAGCAGAAGATATAGTAGATAAATTAACTGGTGAAGTTTTAGTTGCAAAAGGTGAAAAAATATCAAGAGCTAATGCTGAAGAAATCCAAAATAGAGGAATAAATTCAGTTGATGTTTTAGTTGAAGACAGAGTAATTAGAATTATTGGTAACCACTTTGTAGATATACATAAGTGTGTGGACTTCGAT
PROTEIN sequence
Length: 352
MVHPVQVGKRTRMSFAKVKDVAEMPNLIEIQLDSYKWFLDAGLYEVFDDINPISNFTGNLVLEFVGYTLDMDNIKYSVEECKERDTTYAAPLKVAVRLQNKETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYNYNVDKTGKKLFSATVIPNRGAWLEYETDSNDVIYVRIDKTRKLPISILGRAMGFGSDQELLEYFGEEERFKATIEKDNTKTKEEALLEIYKRLRPGEPPTVDSAISLIDSLFFDAKRYDLSRVGRYKFNKKLAIGLRIANQIAAEDIVDKLTGEVLVAKGEKISRANAEEIQNRGINSVDVLVEDRVIRIIGNHFVDIHKCVDFD