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NECEvent2014_8_7_scaffold_6266_1

Organism: NECEvent2014_8_7_Clostridium_perfringens_32_6_partial

near complete RP 44 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..633)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=883064 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 207.0
  • Bit_score: 404
  • Evalue 8.60e-110
Transcription-repair-coupling factor n=1 Tax=Clostridium perfringens F262 RepID=H7CZI9_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 206.0
  • Bit_score: 402
  • Evalue 3.10e-109
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 207.0
  • Bit_score: 404
  • Evalue 2.30e-110

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 633
ATGATTTATAACTGAATGTATTATTTACCTTCAAGAGAGATTGTGTTTTACAATATAGATGCTATTTCTGGAGATTTAAGATGGGCAAGGTTAAAGGTTATAAAGGAAATGCTAAGAAGCACTAAAAAAATTATAGTTACTTCTATAGATGCTTTTGCAGCAACTTATACACCTAAGGAGCTTTATAAAAGTCATATATTAAAAATTAAAGTTGGAGATGAAGTCGATTTTAAAGAGATTTCTCATAAACTTATTGAATCAGGTTATGAAAGATTAGAAACAGTTGAAGGAAAAGGTGAATTTTCATTAAGAGGAGGAATATTAGATGTATTTCCTCCTAATTCTGCTAATCCTTTTAGAATAGAGTTATTTGGAGATGAAGTTGATTCTATTAGAACTTTTAATGTAGAATCACAAAGAAGTATAGAAAAGGTAAAGAGAGCAGAAATATTCCCTGCTAAGGAAGTTATATTAAGTAAAGAAACTATAGAACATGCTGTAGAGAAGATGAGAAAAGAACTTTCTGACTTTGAAAACAAAGTTTCTGATAAGGAAATAAAAGAGAGACTTAGAAAATTAATAGAAAGAAATATAGAATCATTACAAGAAAATTGGAGCTTTGAAACTATAGAT
PROTEIN sequence
Length: 211
MIYN*MYYLPSREIVFYNIDAISGDLRWARLKVIKEMLRSTKKIIVTSIDAFAATYTPKELYKSHILKIKVGDEVDFKEISHKLIESGYERLETVEGKGEFSLRGGILDVFPPNSANPFRIELFGDEVDSIRTFNVESQRSIEKVKRAEIFPAKEVILSKETIEHAVEKMRKELSDFENKVSDKEIKERLRKLIERNIESLQENWSFETID