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NECEvent2014_8_7_scaffold_4281_2

Organism: NECEvent2014_8_7_Streptococcus_HSISS3-rel_41_4_v_partial

partial RP 17 / 55 BSCG 17 / 51 ASCG 8 / 38
Location: 338..1276

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 609
  • Evalue 6.90e-172
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 609
  • Evalue 3.40e-171
DNA-directed RNA polymerase subunit alpha n=6 Tax=Streptococcus RepID=F8LLR2_STREH similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 609
  • Evalue 2.40e-171
  • rbh

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Taxonomy

Streptococcus salivarius CAG:79 → Streptococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 939
ATGATTGAGTTTGAAAAACCAATAATAACAAAAATTGATGAAAATAAAGATTACGGCAAATTTGTCATCGAACCACTAGAACGTGGTTATGGTACAACTTTGGGTAACTCTCTTCGTCGTGTACTTTTGTCATCACTTCCAGGTGCTGCGGTAACATCAATTAAGATTGATGGAGTACTCCACGAATTTGATACCGTACCAGGCGTCCGTGAAGACGTGATGCAAATCATCCTTAATATTAAAGGACTTGCTGTAAAATCTTACGTCGAAGACGAAAAAACAATTGAACTTGATGTCCAAGGTCCAGCTGAAGTTACTGCTGGAGATATCTTGACTGATAGCGACATTGAAATTGTTAACCCTGATCATTATCTTTTCACTATCGCTGAAGGAGCTTCTTTGAAAGCGACTATGACAGTAGCTACAAACCGTGGTTATGTTCCAGCAGATGAAAACAAGAAAGATGATGCACCAGTGGGAACATTGGCTGTAGATTCAATCTACACACCAGTGAAAAAAGTCAATTATCAAGTTGAACCTGCCCGTGTAGGTAGCAACGATGGTTTTGATAAATTGACAATCGAAATCATGACAAACGGAACAATCATCCCTGAAGATGCCCTCGGTCTCTCGGCTCGCGTTTTGATTGAACACTTGAACTTGTTTACTGACCTTACTGATGTTGCTAAAGCTACTGATGTAATGAAAGAAACTGAAAAAGTGAACGATGAAAAGGTGCTTGACCGTACCATCGAAGAACTTGATTTGTCTGTACGCTCATATAACTGTTTGAAACGTGCCGGTATTAATACCGTTCATGATTTGACAGAAAAAACTGAGCCTGAAATGATGAAAGTCCGTAACCTAGGTCGTAAATCTCTTGAAGAAGTCAAAGTTAAGTTGGCTGATCTTGGACTTGGACTTAAAAACGATAAATAA
PROTEIN sequence
Length: 313
MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVLHEFDTVPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVQGPAEVTAGDILTDSDIEIVNPDHYLFTIAEGASLKATMTVATNRGYVPADENKKDDAPVGTLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTDVAKATDVMKETEKVNDEKVLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVKLADLGLGLKNDK*