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NECEvent2014_8_7_scaffold_5035_2

Organism: NECEvent2014_8_7_Clostridium_paraputrificum_36_4_v_partial

partial RP 6 / 55 BSCG 7 / 51 ASCG 0 / 38
Location: 557..1246

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPD5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 229.0
  • Bit_score: 418
  • Evalue 3.40e-114
  • rbh
rplA; ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 229.0
  • Bit_score: 425
  • Evalue 1.40e-116
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 229.0
  • Bit_score: 425
  • Evalue 6.70e-116

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
ATGGGAAAGAAATATGTTGAAAGTGCAAAGTTAATAGATAAGAATACTTTATACAATCCAGCAGAAGCTTTAGAGCTATCTGTAAAAACTGCAAAAGCTAATTTCGATGAAACTATCGAATTACATGTAAGACTTGGGGTAGATCCAAGACATGCAGATCAACAAGTTAGAGGAGCAGTTGTATTACCAAACGGAACTGGTAAGACTGTAAGAGTATTAGTATTTGCTAAAGGAGATAAGGCTAAGGAAGCAGAAGCGGCAGGAGCAGAATTTGTCGGAGCTGAAGAATTAGTTCAAAAGATCCAATCAGAAAACTGGTTCGACTACGATGTAGTTGTAGCAACTCCAGATATGATGGGTGTTGTTGGTAGAATAGGTAGAATACTTGGACCTAAGGGATTAATGCCAAACCCTAAGTCAGGAACAGTAACATTTGATGTTGCTAAGGCAATTGCTGACATTAAGGCTGGTAAGGTTGAATATAGAGTTGATAAGACTGCTATAGTTCACTGCCCAATTGGTAAGAAGTCATTCGGTGCTGAAAAGTTAAAGGAAAACTTCCACGCATTAATGGAAGCTTTAATTAAGGCTAAGCCAGCAGCAGCTAAGGGACAATATGTAAAATCAGTAACTGTTTCAAGCACAATGGGACCAGGAGCTAAGATTAACCCAGTAAAAGTTTTAGAATAG
PROTEIN sequence
Length: 230
MGKKYVESAKLIDKNTLYNPAEALELSVKTAKANFDETIELHVRLGVDPRHADQQVRGAVVLPNGTGKTVRVLVFAKGDKAKEAEAAGAEFVGAEELVQKIQSENWFDYDVVVATPDMMGVVGRIGRILGPKGLMPNPKSGTVTFDVAKAIADIKAGKVEYRVDKTAIVHCPIGKKSFGAEKLKENFHALMEALIKAKPAAAKGQYVKSVTVSSTMGPGAKINPVKVLE*