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NECEvent2014_8_7_scaffold_16_34

Organism: NECEvent2014_8_7_Escherichia_coli_49_99_partial

partial RP 24 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(38917..39576)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 451
  • Evalue 4.90e-124
Ribosomal large subunit pseudouridine synthase A n=734 Tax=Enterobacteriaceae RepID=RLUA_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 451
  • Evalue 3.50e-124
  • rbh
ribosomal large subunit pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 219.0
  • Bit_score: 451
  • Evalue 9.90e-125

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGGGATGGAAAACTACAATCCACCGCAGGAACCCTGGTTGGTTATCCTGTATCAGGATGACCATATTATGGTGGTCAACAAGCCGAGCGGTTTGTTGTCAGTGCCGGGTCGTCTGGAAGAGCACAAAGACAGCGTGATGACGCGCATTCAGCGTGATTATCCGCAGGCAGAATCGGTGCATCGTCTGGATATGGCTACCAGCGGCGTGATTGTAGTGGCGCTGACCAAAGCCGCGGAGCGGGAGTTAAAACGCCAGTTCCGCGAGCGCGAGCCGAAAAAGCAGTATGTGGCCCGCGTCTGGGGGCATCCATCCCCCGCAGAAGGTCTGGTGGATCTGCCGCTGATTTGCGACTGGCCAAACCGCCCGAAACAGAAAGTCTGTTACGAAACGGGTAAACCTGCGCAGACGGAATATGAAGTGGTGGAGTATGCGGCGGATAACACGGCAAGAGTGGTGTTAAAACCGATTACCGGGCGTTCGCATCAATTGCGTGTGCATATGCTGGCGCTGGGTCATCCGATTCTCGGCGATCGTTTTTATGCATCACCAGAAGCGAGAGCGATGGCACCACGTTTGTTGCTACATGCAGAGATGTTGACGATTACCCATCCGGCGTATGGCAATAGTATGACGTTTAAAGCGCCAGCGGATTTTTAA
PROTEIN sequence
Length: 220
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF*