ggKbase home page

NECEvent2014_8_7_scaffold_22_8

Organism: NECEvent2014_8_7_Escherichia_coli_49_99_partial

partial RP 24 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(4986..5636)

Top 3 Functional Annotations

Value Algorithm Source
CsgBAC operon transcriptional regulatory protein n=57 Tax=Escherichia RepID=CSGD_ECOLI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 216.0
  • Bit_score: 434
  • Evalue 7.50e-119
  • rbh
csgD; DNA-binding transcriptional regulator CsgD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 216.0
  • Bit_score: 434
  • Evalue 2.10e-119
  • rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFK14098.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 216.0
  • Bit_score: 434
  • Evalue 1.00e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGTTTAATGAAGTCCATAGTATTCATGGTCATACATTATTGTTGATCACTAAATCTTCTTTGCAGGCGACAGCTCTCTTGCAGCACCTTAAACAATCGCTGGCAATTACAGGAAAATTACATAATATTCAACGTTCTCTGGACGATATCTCTTCAGGCTCTATTATTCTTCTGGATATGATGGAAGCGGATAAAAAGCTTATCCATTATTGGCAGGATACTTTGAGCAGGAAAAACAACAATATCAAAATATTGTTGCTAAATACGCCTGAAGATTACCCGTACCGCGACATTGAAAACTGGCCTCATATCAACGGCGTTTTTTATTCCATGGAGGATCAAGAACGTGTTGTCAATGGGTTGCAAGGCGTCCTGCGCGGCGAATGCTACTTTACGCAAAAGCTTGCCAGCTACCTGATTACGCATTCAGGTAACTATCGTTATAACAGCACGGAATCAGCCCTCCTTACTCATCGGGAAAAAGAGATCCTGAATAAGCTGCGTATCGGCGCGTCTAATAACGAGATCGCTCGTTCGTTGTTCATCAGCGAAAATACGGTTAAAACGCATCTTTATAATCTTTTCAAGAAGATAGCCGTAAAAAACCGGACACAAGCGGTTTCCTGGGCAAACGATAACCTCAGGCGATAA
PROTEIN sequence
Length: 217
MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR*