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NECEvent2014_8_7_scaffold_45_1

Organism: NECEvent2014_8_7_Escherichia_coli_49_99_partial

partial RP 24 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(1..180)

Top 3 Functional Annotations

Value Algorithm Source
RhsC domain protein n=1 Tax=Shigella flexneri CCH060 RepID=I6BDN1_SHIFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 127
  • Evalue 5.40e-27
YD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 127
  • Evalue 1.50e-27
Protein rhsC {ECO:0000313|EMBL:EQN23492.1}; Flags: Fragment;; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 127
  • Evalue 7.60e-27

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 180
ATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGT
PROTEIN sequence
Length: 60
MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPG