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NECEvent2014_8_7_scaffold_101_19

Organism: NECEvent2014_8_7_Escherichia_coli_49_99_partial

partial RP 24 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 22322..22684

Top 3 Functional Annotations

Value Algorithm Source
RTX toxin RtxA n=1 Tax=Escherichia coli TA280 RepID=F4UZH3_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 120.0
  • Bit_score: 208
  • Evalue 3.70e-51
RTX toxin RtxA {ECO:0000313|EMBL:EGI42074.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280. similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 120.0
  • Bit_score: 209
  • Evalue 3.00e-51

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
TTGCCAGATGATATTAGAGACGAGGAGGGGGAAGCTCATGTCAAGTATATGATAAGCAAGGATTATTTTAATGAATCAGCTATGCTTGAAGAGTGGTTTACAATTAAAAATAAGCCGAGTGCTCATTATATGTTATTAAGTAAAAACTGTTCGCATATTGTGGCTAGAGTATTGAATGCCGGTTTTATTCGACATGAGAACGGATTTTCAAGGTTGTCCAAAAGTTGGAATATTACAAAGCCTCGTGATATCGCATCGCAACTTAATACATTAGCTTCATTGGGAGCAGTGACAAAACACGTGAATAATAATTGCCCGAAGCGTATTAATAGATTAGGATACGTTCTTTCGGGTATGCGTTAA
PROTEIN sequence
Length: 121
LPDDIRDEEGEAHVKYMISKDYFNESAMLEEWFTIKNKPSAHYMLLSKNCSHIVARVLNAGFIRHENGFSRLSKSWNITKPRDIASQLNTLASLGAVTKHVNNNCPKRINRLGYVLSGMR*