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NECEvent2014_8_7_Enterobacteriales_53_5_partial

NECEvent2014_8_7_Enterobacteriales_53_5

In projects: NECEvent2014_8_7

Consensus taxonomy: Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: NECEvent2014_8_7_UNK

Properties

Avg. coverage: 5.02 Longest contig: 6.91 Kbp Bin length: 1.66 Mbp GC content: 53.37 %

Contigs count: 1001 Features count: 2364 rRNAs count: 0 tRNAs count: 10

Genome completeness

partial RP 3 / 55 BSCG 3 / 51 ASCG 6 / 38

Description

From TS ESOM, area 2

Displaying items 651-700 of 1001 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
NECEvent2014_8_7_scaffold_2439 178_007_scaffold_2439 Species: Pantoea sp. PSNIH2 (50%)	2	2386 bp	50.59	4.02	81.60
NECEvent2014_8_7_scaffold_2696 178_007_scaffold_2696 Species: Rahnella aquatilis (50%)	2	2192 bp	50.46	4.24	76.64
NECEvent2014_8_7_scaffold_3720 178_007_scaffold_3720 Species: Citrobacter koseri (100%)	2	1671 bp	50.27	3.59	81.15
NECEvent2014_8_7_scaffold_2697 178_007_scaffold_2697 Species: Kluyvera ascorbata (50%)	2	2191 bp	46.87	5.13	84.89
NECEvent2014_8_7_scaffold_3977 178_007_scaffold_3977 Species: Salmonella enterica (50%)	2	1571 bp	49.14	4.49	90.32
NECEvent2014_8_7_scaffold_5001 178_007_scaffold_5001 Species: Kosakonia sacchari (50%)	2	1302 bp	56.53	2.76	99.08
NECEvent2014_8_7_scaffold_5257 178_007_scaffold_5257 Species: Enterobacter sp. YD4 (50%)	2	1248 bp	56.89	4.81	86.54
NECEvent2014_8_7_scaffold_5513 178_007_scaffold_5513 Species: Klebsiella quasipneumoniae (50%)	2	1194 bp	51.51	3.64	92.71
NECEvent2014_8_7_scaffold_5002 178_007_scaffold_5002 Species: Enterobacter cloacae (50%)	2	1302 bp	45.85	4.03	37.10
NECEvent2014_8_7_scaffold_2699 178_007_scaffold_2699 Species: Salmonella bongori (50%)	2	2190 bp	52.37	4.52	80.00
NECEvent2014_8_7_scaffold_3723 178_007_scaffold_3723 Species: Leclercia adecarboxylata (50%)	2	1671 bp	56.79	6.28	87.79
NECEvent2014_8_7_scaffold_6284 178_007_scaffold_6284 Species: Kosakonia radicincitans (50%)	2	1075 bp	59.91	3.63	81.77
NECEvent2014_8_7_scaffold_3213 178_007_scaffold_3213 Species: Kosakonia sacchari (50%)	2	1897 bp	57.46	4.67	94.89
NECEvent2014_8_7_scaffold_4237 178_007_scaffold_4237 Species: Kosakonia radicincitans (100%)	2	1497 bp	54.38	4.01	83.17
NECEvent2014_8_7_scaffold_6029 178_007_scaffold_6029 Species: Citrobacter amalonaticus (50%)	2	1110 bp	54.59	4.05	98.11
NECEvent2014_8_7_scaffold_6030 178_007_scaffold_6030 Species: Kosakonia sacchari (50%)	2	1110 bp	54.86	5.14	100.54
NECEvent2014_8_7_scaffold_3729 178_007_scaffold_3729 Species: Kosakonia sacchari (50%)	2	1668 bp	52.88	3.60	96.22
NECEvent2014_8_7_scaffold_3985 178_007_scaffold_3985 Species: Salmonella enterica (100%)	2	1566 bp	49.36	5.17	77.97
NECEvent2014_8_7_scaffold_5777 178_007_scaffold_5777 Species: Salmonella enterica (50%)	2	1148 bp	53.75	3.14	94.60
NECEvent2014_8_7_scaffold_6801 178_007_scaffold_6801 Species: Kluyvera ascorbata (50%)	2	1006 bp	51.69	5.96	94.23
NECEvent2014_8_7_scaffold_6035 178_007_scaffold_6035 Species: Escherichia albertii (50%)	2	1109 bp	51.85	4.60	95.49
NECEvent2014_8_7_scaffold_5268 178_007_scaffold_5268 Species: Citrobacter amalonaticus (50%)	2	1246 bp	52.25	4.33	88.36
NECEvent2014_8_7_scaffold_5780 178_007_scaffold_5780 Species: Kosakonia sacchari (100%)	2	1148 bp	46.08	4.31	92.51
NECEvent2014_8_7_scaffold_4757 178_007_scaffold_4757 Species: Escherichia vulneris (50%)	2	1361 bp	59.44	3.42	100.74
NECEvent2014_8_7_scaffold_5013 178_007_scaffold_5013 Species: Citrobacter koseri (50%)	2	1300 bp	51.92	4.62	101.31
NECEvent2014_8_7_scaffold_5525 178_007_scaffold_5525 Species: Escherichia coli (50%)	2	1192 bp	49.41	6.80	90.10
NECEvent2014_8_7_scaffold_5781 178_007_scaffold_5781 Species: Salmonella enterica (50%)	2	1148 bp	45.56	4.18	100.09
NECEvent2014_8_7_scaffold_4758 178_007_scaffold_4758 Species: Pectobacterium carotovorum (50%)	2	1361 bp	54.08	4.85	91.48
NECEvent2014_8_7_scaffold_5527 178_007_scaffold_5527 Species: Kluyvera ascorbata (50%)	2	1192 bp	55.45	5.29	99.16
NECEvent2014_8_7_scaffold_3993 178_007_scaffold_3993 Species: Kosakonia sacchari (50%)	2	1564 bp	53.77	3.07	98.40
NECEvent2014_8_7_scaffold_4249 178_007_scaffold_4249 Species: Cronobacter malonaticus (50%)	2	1492 bp	54.96	4.42	105.36
NECEvent2014_8_7_scaffold_4505 178_007_scaffold_4505 Species: Enterobacter aerogenes (50%)	2	1420 bp	45.99	4.01	64.44
NECEvent2014_8_7_scaffold_3738 178_007_scaffold_3738 Species: Dickeya zeae (50%)	2	1665 bp	54.95	3.96	100.18
NECEvent2014_8_7_scaffold_4251 178_007_scaffold_4251 Species: Enterobacter sp. R4-368 (50%)	2	1491 bp	53.39	4.73	83.70
NECEvent2014_8_7_scaffold_5531 178_007_scaffold_5531 Species: Klebsiella variicola CAG:634 (50%)	2	1191 bp	46.68	3.78	66.25
NECEvent2014_8_7_scaffold_2460 178_007_scaffold_2460 Species: Enterobacter sp. R4-368 (100%)	2	2371 bp	56.31	4.74	93.88
NECEvent2014_8_7_scaffold_4252 178_007_scaffold_4252 Species: Leclercia adecarboxylata (50%)	2	1491 bp	52.58	4.63	95.37
NECEvent2014_8_7_scaffold_4508 178_007_scaffold_4508 Species: Dickeya zeae (100%)	2	1420 bp	53.80	3.80	85.56
NECEvent2014_8_7_scaffold_5020 178_007_scaffold_5020 Species: Shimwellia blattae (100%)	2	1299 bp	59.51	4.16	96.77
NECEvent2014_8_7_scaffold_3997 178_007_scaffold_3997 Species: Enterobacter sp. YD4 (100%)	2	1562 bp	52.11	3.46	99.10
NECEvent2014_8_7_scaffold_3744 178_007_scaffold_3744 Species: Enterobacter sp. YD4 (50%)	2	1663 bp	53.22	2.89	95.43
NECEvent2014_8_7_scaffold_4512 178_007_scaffold_4512 Species: Enterobacter cloacae (50%)	2	1419 bp	53.56	3.59	97.25
NECEvent2014_8_7_scaffold_6305 178_007_scaffold_6305 Species: Yokenella regensburgei (50%)	2	1073 bp	52.75	4.05	96.18
NECEvent2014_8_7_scaffold_5794 178_007_scaffold_5794 Species: Hafnia paralvei (50%)	2	1146 bp	49.91	4.45	87.70
NECEvent2014_8_7_scaffold_3491 178_007_scaffold_3491 Species: Enterobacter cloacae (50%)	2	1763 bp	51.45	3.57	100.40
NECEvent2014_8_7_scaffold_6051 178_007_scaffold_6051 Species: Enterobacter sp. YD4 (50%)	2	1107 bp	54.92	2.98	74.80
NECEvent2014_8_7_scaffold_6563 178_007_scaffold_6563 Species: Escherichia coli (50%)	2	1037 bp	46.00	4.63	63.93
NECEvent2014_8_7_scaffold_4260 178_007_scaffold_4260 Species: Kosakonia radicincitans (50%)	2	1489 bp	55.61	6.04	98.93
NECEvent2014_8_7_scaffold_5028 178_007_scaffold_5028 Species: Enterobacter hormaechei (50%)	2	1298 bp	54.85	3.00	89.21
NECEvent2014_8_7_scaffold_5796 178_007_scaffold_5796 Species: Enterobacter cloacae (50%)	2	1146 bp	52.53	4.32	74.87

Displaying items 651-700 of 1001 in total

NECEvent2014_8_7_Enterobacteriales_53_5_partial

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

NECEvent2014_8_7_Enterobacteriales_53_5_partial

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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