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NECEvent2014_9_1_scaffold_1341_3

Organism: NECEvent2014_9_1_Corynebacterium_tuberculostearicum-rel_58_4_parital

partial RP 16 / 55 MC: 1 BSCG 11 / 51 ASCG 6 / 38
Location: comp(367..1224)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate binding domain protein n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=E2S374_9CORY similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 272.0
  • Bit_score: 539
  • Evalue 2.80e-150
  • rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:EFQ80835.1}; TaxID=525264 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium p similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 272.0
  • Bit_score: 539
  • Evalue 4.00e-150
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 258.0
  • Bit_score: 357
  • Evalue 3.30e-96

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Taxonomy

Corynebacterium pseudogenitalium → Corynebacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 858
TGCTTTACGGCAGAATTGCGGGAGGGCGTTCATTCTGGTCGGGGTTACAATGAAAATATGTACCCCTCGCGAATCGGTAGTAGTGATGACTTTTTACCAGTTCGGCGCGGATTTGTCCCCGATGCCCAGACAGTCGACGCTGTACTTGCTGTGGCACGGTATGGGGGTATGAACCGGGCCGCCATACACCTGAATGTCTCCCAACAGTCGGTGAGTAATCGCATTGCCAATTTTGAAAGGCATCTAAATCAACGCATTTTTTGGCGTGGAGCTGCGGGTAGTTTTACTACGGAAGTCGGCTCCCAGGTTGTCCGGGTACTCGAGGTGCTAGAGGAAGCCTTGAACGACTGCGCGCGTGGTCTTGAGAGAGCCATCGGTGAAGACGTCACCGAGGAAATTAAATTGGTGGTCTCGCATACAGTCGCCGAGGTAGATTACCCGCGCTGGGCTGCGGCGTTTCAACGTGCTCACCCGAAAACTTTTCTGCGTATGCGCCAGCTCAATAGCCGGGAGGCCCAGCGCCATGTAGTACAGGGATTGGCGGATTTAGCCATTGTGGAAGGTAACTGGGTATCCCATGAACTGCACCAGCGCGTAGCCGGACACGACGAACTCGTTGTTGTCGTCCCTGCAGGGCATTATTGGGCTCGCGCGGATAGCCGAAGTGGATCTGGGGCTCCTACAGTATCCGAACCATTGAAGGGGGTGGCTGCGGTATCTAAAGAGGAGCTGCAGACTACTCCTTTGGTTCTGCGTGAGCAGGGAAGCGGCACGCGGGAGGTAGTAGAGGACATTCTGGGGTCACTCGCTCCTCCTGAGGAGAATTTGGATCTCTGGGGGCGCAACGCGCTGCTATAG
PROTEIN sequence
Length: 286
CFTAELREGVHSGRGYNENMYPSRIGSSDDFLPVRRGFVPDAQTVDAVLAVARYGGMNRAAIHLNVSQQSVSNRIANFERHLNQRIFWRGAAGSFTTEVGSQVVRVLEVLEEALNDCARGLERAIGEDVTEEIKLVVSHTVAEVDYPRWAAAFQRAHPKTFLRMRQLNSREAQRHVVQGLADLAIVEGNWVSHELHQRVAGHDELVVVVPAGHYWARADSRSGSGAPTVSEPLKGVAAVSKEELQTTPLVLREQGSGTREVVEDILGSLAPPEENLDLWGRNALL*