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Infant_2_PA_28_109

Organism: Infant_2_PA

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 0 / 38
Location: comp(126956..130408)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2257
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969, ECO:0000313|EMBL:CKH18871.1};; TaxID UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2257
  • Evalue 0.0
Transcription-repair coupling factor n=22 Tax=Pseudomonas RepID=G5FP31_9PSED similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 2255
  • Evalue 0.0

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3453
TTGCCCGTGTCCGTACTGCGTCTTCCCAGCCTGCCGGCCAGCGCCGGCAAGCAACACTGGGGCAACCTCCCCGGTGCCGCGCTGAGCCTGGCTGTCGCCGAGGCCGCCAGTTCCGCCAAGCGCTTCACCCTGCTGCTGACCGCCGACAGCCAGAATGCCGAACGCCTGGAACAGGAACTGCGGTTCTTCGCCCCCGACCTGCCGGTATTGCATTTCCCCGATTGGGAAACCCTGCCCTACGACGTCTTTTCGCCGCACCAGGACATCATTTCCCAGCGCATCGCCGCCCTCTACCAGTTGCCGCAGCTCAAGCACGGCGTGCTGGTGGTGCCGATCTCCACCGCCTTGCACCGCCTGGCGCCGACCCGCTTCCTGCTCGGCAGCAGCCTGGTCCTCGACGTCGGCCAGAAACTCGACGTCGAGCGGATGCGCCTGCGCCTGGAAGGCGCCGGCTACCGCTGCGTCGACACGGTCTACGAGCACGGCGAGTTCGCCGTCCGCGGCGCGCTGATCGACCTGTTCCCGATGGGCAGCGAGTTGCCCTTCCGTATCGACCTGTTCGACGACGAGATCGAGACCCTGCGCACCTTCGACCCGGAGACCCAGCGCTCCATCGACAAGGTCGAGTCGATCCGCCTGCTGCCGGCACGCGAATTCCCCCTGAACAAGGAAGCGGTCACCGGCTTCCGCGGCCGCTTCCGCGAGCGCTTCGACGTCGACTACCGGCGCTGCCCGATCTACCAGGACCTCGCCAGCGGTTTGACACCCTCGGGAATCGAGTACTACCTGCCGCTGTTCTTCGAGGAAACCGCGACCCTCTTCGACTACCTGCCGCAAGACACCCAGGTGTTCTCCCTGCCCGGCATCGAACAGGCCGCGGAGCAGTTCTGGAATGACGTACGCAGCCGCTACGAGGACCGCCGGGTCGATCCGGAACGGCCATTGCTGCCGCCGGCGGAAGTGTTCCTTCCGGTGGAAGACTGCTTCGCCCGGCTGAAGAACTGGCCACGGGTGGTCGCCAGCCAGGAGGACGTCGAGCCGGGCGTCGGGCGCGAGCGCTTCCCGGCCCTGCCGCTGCCGAACCTGGCGATCGAAGCCAAGGCCGCCGAGCCGCTGGCCGCGCTGCGCCGGTTCATCGAGGAGTTCCCCGGCCGCGTACTGTTCTGCGCCGAATCGGCCGGACGCCGGGAAGTCCTGCTGGAGCTGCTGGCCCGACTGAAGCTGCGCCCCGAGGAAGTCGACGGCTGGCCGGCCTTCCTCGCCAGCCAGGCACGCCTGGCGATCAGCATCGCGCCGCTGGACGAGGGCCTGCTGCTGGACCATCCGGCCCTCGCCCTGGTCGCCGAAAGCCCGCTGTTCGGCCAGCGCGTCATGCAGCGCCGGCGCCGGGAAAAGACCCGCGACGGCGGCGACGCGGTGATCAAGAACCTCACCGAGCTGCGCGAAGGCGCGCCGGTGGTGCACATCGACCATGGCGTCGGCCGCTACCTGGGCCTGATCACCCTCGTGGTGGACAACCAGCAGGCGGAATTCCTCATGCTGCAATACGCCGAGGACGCCAAGCTCTACGTGCCGGTCGCCAACCTGCACCTGATCGCCCGCTACACCGGCGCCGACGACGCCCTGGCGCCGTTGCACCGGCTCGGCTCGGAAACCTGGCAGAAGGCCAAGCGCAAGGCCGCCGAGCAGGTCCGCGACGTCGCCGCCGAGCTGCTCGACATCTACGCCCGCCGCGCCGCCCGCGAAGGCTTCGCGTTCAAGGATCCGCAGGCCGACTACGCGACCTTCTCGGCCGGCTTCCCGTTCGAGGAGACGCCGGACCAGCAAAGCGCCATCGAGGCGGTGGTCGCCGATATGCTCGCGCCCAGGCCAATGGACCGCCTGGTCTGCGGCGACGTCGGCTTCGGCAAGACCGAAGTGGCGATGCGCGCGGCGTTCGTCGCCGTGCATAGCGGCAAGCAGGTGGCGGTGCTGGTGCCCACCACCCTGCTCGCCCAGCAGCACTACAACAGCTTCCGCGACCGCTTCGCCGACTGGCCGGTGAGCGTCGAGGTGATGAGCCGCTTCAAGAGCGCCAAGGAAGTCGAGAACGCTGCGCGGCTACTGGCCGAAGGCAAGATCGACATCCTCATCGGGACCCACAAGCTGCTCCAGGAAGACGTGAAGTTCGCCAACCTGGGGTTGGTCGTGATCGACGAGGAACACCGCTTCGGGGTGCGCCAGAAGGAGCAGCTCAAGGCCCTGCGCAGCGAAGTGGACATCCTCACCCTCACCGCCACGCCGATCCCGCGGACCCTGAACATGGCCGTCTCCGGCATGCGCGACCTGTCCATCATCGCCACGCCGCCGGCGCGCCGCCTGTCGGTGCGCACCTTCGTCATGGAGCAGCAGAACGCGGTAATCAAGGAAGCGCTGCTCCGCGAACTGCTGCGCGGCGGCCAGGTGTACTACCTGCACAACGAAGTGAAGACCATCGAGAAGTGCGCCCGCGACCTCGCCGAACTGGTCCCGGAGGCGCGCATCGGCATCGGCCACGGACAGATGCACGAGCGCGAGCTGGAACAGGTGATGAGCGACTTCTACCACAAACGCTTCAACGTGCTGGTGGCCTCGACCATCATCGAGACCGGCATCGACGTGCCCAGCGCCAACACCATCCTCATCGAGCGCGCCGACAAGTTCGGCCTGGCCCAGTTGCACCAGTTGCGCGGCCGCGTCGGTCGCAGCCACCACCAGGCCTACGCCTACCTGCTGACACCGCCGCGCCGTCAGATGACCCCGGACGCCGAGAAACGCCTGGAAGCCATCGCCAACGCCCAGGACCTGGGCGCCGGCTTCGTCCTCGCCACCCACGACCTGGAGATCCGCGGCGCCGGCGAGTTGCTCGGCGACGGCCAGAGCGGGCAGATCCAGGCGGTCGGCTTCACCCTCTACATGGAAATGCTCGAACGGGCGGTGAAGGCCATCCGCAAGGGCGAGCAACCGAACCTCGAGCAGCCACTGGGCGGCGGGCCGGAGGTCAACCTGCGGGTGCCTGCGCTGATCCCCGAGGATTACCTGCCCGACGTGCATGCCCGGCTGATCCTCTACAAGCGCATCGCCAACGCCCCTGACGAGGAAGGTTTGCGCGAGTTGCAGGTGGAGATGATCGACCGCTTCGGGCTCCTGCCCGATCCGGCGAAGAACCTGATGCGCCTGACCCTTCTGAAACTGCAGGCGGAAAAACTTGGAATACTCAAGGTCGATGCCGGACCGCAGGGCGGTCGTATAGAATTCGCCGCCGATACCCAGGTCGACCCGCTGGTATTGATCAAGCTGATCCAGGGCCAACCGAACCGCTACAAGTTCGAAGGCGCAACCCTGTTCCGCTTCCAGGTGCCCATGGAACGACCGGAAGAACGCTTCAATACCCTGGAGGCGCTGTTCGAGCGCCTGACACCGCAAACCACCTAA
PROTEIN sequence
Length: 1151
LPVSVLRLPSLPASAGKQHWGNLPGAALSLAVAEAASSAKRFTLLLTADSQNAERLEQELRFFAPDLPVLHFPDWETLPYDVFSPHQDIISQRIAALYQLPQLKHGVLVVPISTALHRLAPTRFLLGSSLVLDVGQKLDVERMRLRLEGAGYRCVDTVYEHGEFAVRGALIDLFPMGSELPFRIDLFDDEIETLRTFDPETQRSIDKVESIRLLPAREFPLNKEAVTGFRGRFRERFDVDYRRCPIYQDLASGLTPSGIEYYLPLFFEETATLFDYLPQDTQVFSLPGIEQAAEQFWNDVRSRYEDRRVDPERPLLPPAEVFLPVEDCFARLKNWPRVVASQEDVEPGVGRERFPALPLPNLAIEAKAAEPLAALRRFIEEFPGRVLFCAESAGRREVLLELLARLKLRPEEVDGWPAFLASQARLAISIAPLDEGLLLDHPALALVAESPLFGQRVMQRRRREKTRDGGDAVIKNLTELREGAPVVHIDHGVGRYLGLITLVVDNQQAEFLMLQYAEDAKLYVPVANLHLIARYTGADDALAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGFAFKDPQADYATFSAGFPFEETPDQQSAIEAVVADMLAPRPMDRLVCGDVGFGKTEVAMRAAFVAVHSGKQVAVLVPTTLLAQQHYNSFRDRFADWPVSVEVMSRFKSAKEVENAARLLAEGKIDILIGTHKLLQEDVKFANLGLVVIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQQNAVIKEALLRELLRGGQVYYLHNEVKTIEKCARDLAELVPEARIGIGHGQMHERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTILIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRRQMTPDAEKRLEAIANAQDLGAGFVLATHDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGEQPNLEQPLGGGPEVNLRVPALIPEDYLPDVHARLILYKRIANAPDEEGLRELQVEMIDRFGLLPDPAKNLMRLTLLKLQAEKLGILKVDAGPQGGRIEFAADTQVDPLVLIKLIQGQPNRYKFEGATLFRFQVPMERPEERFNTLEALFERLTPQTT*