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Infant_2_PA_33_24

Organism: Infant_2_PA

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 0 / 38
Location: comp(25096..26058)

Top 3 Functional Annotations

Value Algorithm Source
rluD; 23S rRNA pseudouridine synthase D KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 638
  • Evalue 1.40e-180
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonad UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 638
  • Evalue 7.10e-180
Ribosomal large subunit pseudouridine synthase D n=24 Tax=Pseudomonas RepID=RLUD_PSEAE similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 637
  • Evalue 1.00e+00

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGTCCGATATGATTCAACGCGCGGCCGAGGTGCCGTTCGAGCTGGGTGGCCAGCGTCTCGACCAGATCGCCGCCCAGCTTTTTCCCGAACACTCCCGCTCCCGTCTGGCCGGCTGGATCAAGGACGGACGCCTGACCGTCGACGGCGCCGTGCTGCGCCCGCGCGACATCGTCCACAGCGGCGCGCAACTGGTCCTGGAGGCCGAGCAGGAAGCCCAGGGCGAGTGGCTCGCACAGGACATCGAGCTGGAAATCGTCTACGAGGACGAGCACATCCTGGTGATCGACAAGCCCGCCGGCCTGGTGGTCCATCCGGCTGCCGGCCATCAGGACGGCACCCTGCTGAATGCCTTGCTCTACCATGTCCCGGACATCGCCAATGTGCCGCGCGCCGGGATCGTCCACCGCCTGGACAAGGACACGACCGGCCTGATGGTGGTGGCCAAGACGCTGGAGGCCCACACCAAGCTGGTGGCGCAACTGCAGGCACGGTCGGTCAGCCGCATCTACGAGGCGATCGTGATCGGCGTGATCACCTCCGGCGGCACCATCGATGCGCCGATCGGACGGCATGGCGTGCAGCGGCAGAAGATGGCGGTGGTCGACGCCGGCAAGGTGGCGGTCAGCCATTACCGCGTGCTGGAACGCTTCCGTGCGCACACCCATACCCGGGTCAAGCTGGAGACCGGGCGTACCCACCAGATCCGCGTGCACATGAGCCATATCGGCTATCCCCTGGTCGGCGATCCGGTCTACGGTGGGCGCTTCAGGATTCCCCCGGTGGCCAGCCAGACCCTGGTCCAGACTCTTCGCGAATTCCCCCGGCAGGCGCTGCACGCGCGCTTCCTCGAACTGGATCACCCGGCCACCGGCGTGCGCATGAAGTGGGAGTCGCCGCTGCCGGAAGACTTCCTCTGGCTGCTCAGCCTGTTGCGCCAGGATCGCGAGGCGTTCGTCGGATGA
PROTEIN sequence
Length: 321
MSDMIQRAAEVPFELGGQRLDQIAAQLFPEHSRSRLAGWIKDGRLTVDGAVLRPRDIVHSGAQLVLEAEQEAQGEWLAQDIELEIVYEDEHILVIDKPAGLVVHPAAGHQDGTLLNALLYHVPDIANVPRAGIVHRLDKDTTGLMVVAKTLEAHTKLVAQLQARSVSRIYEAIVIGVITSGGTIDAPIGRHGVQRQKMAVVDAGKVAVSHYRVLERFRAHTHTRVKLETGRTHQIRVHMSHIGYPLVGDPVYGGRFRIPPVASQTLVQTLREFPRQALHARFLELDHPATGVRMKWESPLPEDFLWLLSLLRQDREAFVG*