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Infant_2_PA_63_11

Organism: Infant_2_PA

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 0 / 38
Location: comp(10183..10692)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 169.0
  • Bit_score: 340
  • Evalue 2.50e-91
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:BAR68123.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI76080.1}; RNA polymerase sigma factor {ECO:00003 UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 169.0
  • Bit_score: 340
  • Evalue 1.20e-90
RNA polymerase sigma factor n=22 Tax=Pseudomonas RepID=F5KDK6_PSEAI similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 340
  • Evalue 3.00e+00

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGATAGCCAAGGCTCCATCAAGAACACCCTGATCGCCCAGTTGTTCCAGCAGAACTACGACTGGCTGTGCAAGAAGCTGTCCTACCAGATCGGCTGTAGCCACAGCGCCGAAGACCTCGCCGCCGAGGCCTTCCTGCAGGTCTGGATGCTCCCCGACCCGGCGTCGATCCGCTCGCCGCGGGCGTTCCTCGCGACCATCGCGCAACGCCTGATGTACGAGAGCTGGCGGCGCAAGGACCTGGAGCGCGCCTACCTGCAGATCCTCGCCGAGGCGCCGGAGGCGGTGCAGCCGTCGCCTCACGAGCAGTGGATGCTGATCGAGAGCCTGCAAGCCATCGACCGCCTGCTCGACGGCCTGTCCGGGCAGGCCAGGGCAGTGTTCCTGATGAGCCAGCTGGAAGGCCTGACCTACGTGCAGATCGGCGAACGCCTCGGATTGTCCCTGGGGCGCATCCACCAGTTGATGAAGGATGCCTTGCACTGCTGCTACCGGGGATTCCAGGAATGA
PROTEIN sequence
Length: 170
MDSQGSIKNTLIAQLFQQNYDWLCKKLSYQIGCSHSAEDLAAEAFLQVWMLPDPASIRSPRAFLATIAQRLMYESWRRKDLERAYLQILAEAPEAVQPSPHEQWMLIESLQAIDRLLDGLSGQARAVFLMSQLEGLTYVQIGERLGLSLGRIHQLMKDALHCCYRGFQE*