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Infant_2_AS_6_30

Organism: Infant_2_AS

near complete RP 52 / 55 MC: 7 BSCG 43 / 51 ASCG 0 / 38
Location: comp(30813..34490)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203556 species="Bacteria; A UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 999.99
  • Bit_score: 1755
  • Evalue 0.0
Transcription-repair coupling factor n=4 Tax=Actinomyces RepID=E6KUJ3_9ACTO similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1746
  • Evalue 0.0
transcription-repair coupling factor KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 999.99
  • Bit_score: 1472
  • Evalue 0.0

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Taxonomy

Actinomyces sp. HPA0247 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3678
ATGAAATTGAACGGCTTGATGGACCTGATCGGAGCCGACCAGGCAGTTCAACAATTCGCCACTTCACTTTCACGGTCCCTGAGCGGCACCATCGTCGCCCCACAAGGCATTCGACCCGGCATGTACGCCCTCGCATCGCGCGAAAGGCTCATTGACGAGGCGGACCCGTCCACCGTTGGACCTCTGATCATCATCACGGCATCGGGGCGAGAAGCCGAAAGGCTGACTGACGCATTGTCTGCATGGGTGCCGAATGTGGGCATGTTCCCCTCGTGGGAAACCCTGCCGCATGAGCGACTGTCACCCCAGGTGGACACGATGGCCCAACGTATCGCCATCTTGCGCCGGCTGACACACCCGGATCCAACCGACCCGGCGACCGCGCCACTGTCCATTGTTGTCATGCCGGTCCGCGCATTCCTCCAACCTGTCATCCACGGGCTGGCCGACCTGGAGCCGGTGCGCGTCAAAGTAGGGGACATGGTGGATCTGCCCAGCATGGTTGACCGTCTGACACAACTGGGATACGAACGCGTGGATATGGTGGAGGCACGCGGACAGGTCAGCGTCCGAGGCGGCATCCTCGATGTTTTCCCACCTCAGGAAGCACACCCTTTACGCGTCGAACTGTGGGGCGATGAGGTTGACGAGATTCGCTGGTTCTCCATGGCTGACCAGCGCACCCTCGGCGCAGCTACCGACGGCCTGTGGGCGGTGGCGTGTCGAGAACTCTTGCTAACCGACGAGGTCCGTGAAAAGGCACGCCATGCTGCTGACACCCTGCCGGGCGCGGCGCAGATTCTGGAACTGGCCAGTGAAGGGATCTACAGCGCAGGCCTGGAGTCTCTGGCCCCTGCTTTGGTGGAGCGCATGGACACCGTCCTTGACATCGCTCCCGAGAGCAGCGTGCTCATCATGGATGAGCCGGAGCGGGTGCGTGCCCGCGCAGCCGACCTTGTGTCAACCACCGAGGAATTCCTTCAGGCAGCATGGACCGCAGCGGCCGATGGCGGCACTGTCCCACTGGAAGCGCGCGACGCTTCGTTCCGTGACCTGGACGAAGTGTGGCAGGCTTCCGGACTTGCGCGGTGGGAGGTCTCCTCACTGGCGCCGGCAGAACTGGCCGATGCGCTGATCGCTGTCGAGGATGACCGAGGTGTGGATACGGACGACGAGCCGGGTGCTTTGCAGGCCCACGAGGCGCACGCCGTGGTGGTCTCACCGACACTGATGGCAGTCGGTGCTCGAGAAGTACGCCCATATCGCGGTGACTTTGATCGAGCGTGCGCCGATTTGGCTGAGCTGTCACACGCCGGGTGGAACATGGTGGTGACCACTCAAGGCCCTGGGCCCGGGCGACGAATCGCCTCGATACTGAACGATGCGCACGTGCCGGCGCGAGTGGTAGAGGAGTTGACGCGCGCTCCTGAAGAAAGTGTCGTGCACGTGACGACCGCGCAAGCCGGCGCCGGGTTTGTAATGGCCGATCAGCACTTGGCAGTCCTTACTGAACAGGACCTGACTGGTCGCGTGGGAGCGACCACTCGCGATATGAGGAAGATGCCGTCGCGGCGCAGGAAGGGCGTCGATCCGCTGACACTGCACGCCGGCGACCTGGTTGTTCACGAACAGCACGGGATCGGACGCTTCCTCGAACTGGTCTCACGCACTGTGGGCAGGGGAGCGTCCGCCGTCACGCGCGACTACCTTGTCATTGAGTACGCTCCCTCGCGCAGGGGACAACCTGGGGACCGTCTGTTCGTGCCGACGAACTCGCTGGATCAGGTCTCCAAATACACGGGATCGGATCAGCCGACACTGACCCGGATGGGTGGGGCTGACTGGGCGAAGACCAAAGCCAAAGCTCGTAAAGCCGTCAAGGAAATCGCCGCTGAGCTGATCCGCCTGTACGCCGCGCGCCAGGCAACAAAAGGGCACGCGTTCAGCGCTGACACCCCCTGGCAGCGCGAACTTGAAGATGCGTTCCCATATGTGGAAACCCCTGATCAGCTCGTGACAATCGATGAAGTCAAAGCTGATATGGAAAAGCCCATGCCGATGGACCGGCTCCTGACAGGAGACGTGGGATACGGCAAAACCGAGATCGCTGTGCGCGCGGCGTTCAAAGCCATCCAGGACGGCAAGCAGGTTGCTGTGCTGGTTCCCACCACCTTGCTGGTCCAGCAGCACTATGACACCTTCAGCGCTCGCTATGCCGGTTTCCCCGTCACAATTGGGACACTGTCACGTTTTTCCACGCCGAAAGAAGCTGAAGAGGTCAAGGAGGCACTTGCGTCCGGTGGTATTGACCTGGTGATCGGCACACACGCCCTGCTGACGGGCACGGTCCGCTTCAAGGATCTGGGTCTAGTCGTCATTGACGAAGAGCAGCGTTTCGGTGTCGAGCATAAGGAGACACTCAAAGCGCTGCGCACTGATGTGGACGTGCTGTCCATGTCGGCAACACCTATCCCTCGAACACTGGAAATGGCGATTTCCGGTATCCGTGAAATGTCGATCCTGCAGACACCGCCAGAAGAGCGTCAGCCGGTTCTGACATTTGTGGGCGCATACACGGATGCGCAGGTTATCGCTGCAGTCCGGCGCGAGCTGCTGCGTGACGGGCAGGTGTTCTACGTCCATAACCGTGTCGAATCCATCAACACGGTGGCTGCTCACCTCAGCGAACTGGTACCCGAAGCGCGCATCCGTGTCGCTCACGGCAAACTGTCCGAACACGAACTTGAACGCGTCATCGTTGATTTCTGGAACCACGACTTCGACGTGCTGGTGTGCACGACAATCGTGGAAACCGGCCTGGATATTTCCAATGCAAACACCCTGATTGTGGACAGGGCTGACGCGTTCGGTCTGTCACAGCTGCACCAGCTGCGTGGCCGAGTGGGACGAGGGCGCGAACGCGCTTATGCTTACTTCTTTTACCCAGCTGACCGCACTCTTACCGAAACGGCCCATGAACGGTTGCGGACAATCGCCCAGTTCACGGATCTGGGCGCCGGACTGCACGTTGCGCAAAAAGACCTCGAAATCCGCGGTGCCGGCAACCTGCTGGGTGGCGCGCAATCAGGTCATATCGAGGGCGTGGGGTTCGATCTGTACGTGCGTATGGTGGCTGACGCAGTGGCAACATTTAAAGGGGAGCGCCCCGCCGAACAGGTGGACGTGCGAGTGGATCTGGCCGTGGATGCGCATATTCCTGCCGAATATGTGACGAGCGAGCGCCTGCGGCTCGAGGTATACGCCAGGATTGCAGGCGTGAGCACACCTGAACAGGAAAGCGATGTGCGCGATGAGCTGGCCGACCGATACGGCCCAATTCCTCCTCAGGTGGATTTGCTGTTCGACATTGCGCGACTGCGTGAGCGCCTGCGCCAGGTCGGTGTCGAAGAGGTCGCCACTCAGGGACGGTACATCAAGTTCGCACCCGTCGAACTTGCTGATTCACAGATGATGCGCCTGAAGCGGCTGCACCCTGGCGCAGTCATTAAGACTGCGGTGCGTCAGATCCTGGTTCCCATCCCAATGACCGCCCACATCGGTGGGCACCCCTTGGCAGACAGCGCCCTCATCGAGTGGACGCTGAATGTCGTTGACACGATCATCGTGCCTTTCGCCGCCTCATCAGAAGGCGGCGCCCCCGGCGTTAAAGACCGGTGA
PROTEIN sequence
Length: 1226
MKLNGLMDLIGADQAVQQFATSLSRSLSGTIVAPQGIRPGMYALASRERLIDEADPSTVGPLIIITASGREAERLTDALSAWVPNVGMFPSWETLPHERLSPQVDTMAQRIAILRRLTHPDPTDPATAPLSIVVMPVRAFLQPVIHGLADLEPVRVKVGDMVDLPSMVDRLTQLGYERVDMVEARGQVSVRGGILDVFPPQEAHPLRVELWGDEVDEIRWFSMADQRTLGAATDGLWAVACRELLLTDEVREKARHAADTLPGAAQILELASEGIYSAGLESLAPALVERMDTVLDIAPESSVLIMDEPERVRARAADLVSTTEEFLQAAWTAAADGGTVPLEARDASFRDLDEVWQASGLARWEVSSLAPAELADALIAVEDDRGVDTDDEPGALQAHEAHAVVVSPTLMAVGAREVRPYRGDFDRACADLAELSHAGWNMVVTTQGPGPGRRIASILNDAHVPARVVEELTRAPEESVVHVTTAQAGAGFVMADQHLAVLTEQDLTGRVGATTRDMRKMPSRRRKGVDPLTLHAGDLVVHEQHGIGRFLELVSRTVGRGASAVTRDYLVIEYAPSRRGQPGDRLFVPTNSLDQVSKYTGSDQPTLTRMGGADWAKTKAKARKAVKEIAAELIRLYAARQATKGHAFSADTPWQRELEDAFPYVETPDQLVTIDEVKADMEKPMPMDRLLTGDVGYGKTEIAVRAAFKAIQDGKQVAVLVPTTLLVQQHYDTFSARYAGFPVTIGTLSRFSTPKEAEEVKEALASGGIDLVIGTHALLTGTVRFKDLGLVVIDEEQRFGVEHKETLKALRTDVDVLSMSATPIPRTLEMAISGIREMSILQTPPEERQPVLTFVGAYTDAQVIAAVRRELLRDGQVFYVHNRVESINTVAAHLSELVPEARIRVAHGKLSEHELERVIVDFWNHDFDVLVCTTIVETGLDISNANTLIVDRADAFGLSQLHQLRGRVGRGRERAYAYFFYPADRTLTETAHERLRTIAQFTDLGAGLHVAQKDLEIRGAGNLLGGAQSGHIEGVGFDLYVRMVADAVATFKGERPAEQVDVRVDLAVDAHIPAEYVTSERLRLEVYARIAGVSTPEQESDVRDELADRYGPIPPQVDLLFDIARLRERLRQVGVEEVATQGRYIKFAPVELADSQMMRLKRLHPGAVIKTAVRQILVPIPMTAHIGGHPLADSALIEWTLNVVDTIIVPFAASSEGGAPGVKDR*