ggKbase home page

Infant_1_EC_5

Alias: scaffold_16

Search features with annotation key words

Displaying items 211-240 of 346 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Infant_1_EC_5_211
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

194267..196162
DNA (1896bp) protein (632aa)
Uncharacterized protein {ECO:0000313|EMBL:ESA69195.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
yciQ; hypothetical protein
Uncharacterized protein YciQ n=151 Tax=cellular organisms RepID=YCIQ_ECOLI
Infant_1_EC_5_212
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196374..197249
DNA (876bp) protein (292aa)
23S rRNA pseudouridylate synthase RluB
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Ribosomal large subunit pseudouridine synthase B n=677 Tax=Enterobacteriaceae RepID=RLUB_ECO57
Infant_1_EC_5_213
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197419..198420
DNA (1002bp) protein (334aa)
Uncharacterized protein {ECO:0000313|EMBL:ESA69197.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
putative lipoprotein rbh
Uncharacterized protein n=12 Tax=Escherichia coli RepID=I2RN65_ECOLX
Infant_1_EC_5_214
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198431..198739
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:ESA69198.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
Uncharacterized protein n=15 Tax=Escherichia RepID=I2RME2_ECOLX
Infant_1_EC_5_215
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198792..199382)
DNA (591bp) protein (197aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ESD78321.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=478 Tax=Enterobacteriaceae RepID=BTUR_ECOL6
Infant_1_EC_5_216
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199379..200137)
DNA (759bp) protein (253aa)
short chain dehydrogenase YciK rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KIG56498.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.
Uncharacterized oxidoreductase YciK n=483 Tax=Enterobacteriaceae RepID=YCIK_ECOLI
Infant_1_EC_5_217
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200357..201406
DNA (1050bp) protein (350aa)
Probable protease SohB n=484 Tax=Enterobacteriaceae RepID=SOHB_ECOLI
sohB; putative periplasmic protease
Putative signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EFK48360.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
Infant_1_EC_5_218
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201442..201693)
DNA (252bp) protein (84aa)
hypothetical protein
PF10692 family protein {ECO:0000313|EMBL:EII23253.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
Protein YciN n=637 Tax=cellular organisms RepID=YCIN_ECO57
Infant_1_EC_5_219
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202073..204670
DNA (2598bp) protein (866aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1268978 species="Bacteria; Proteobac
DNA topoisomerase I
DNA topoisomerase 1 n=744 Tax=Bacteria RepID=TOP1_ECOLI
Infant_1_EC_5_220
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204880..205854
DNA (975bp) protein (325aa)
LysR family transcriptional regulator
HTH-type transcriptional regulator CysB {ECO:0000313|EMBL:KDW81966.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
HTH-type transcriptional regulator CysB n=855 Tax=cellular organisms RepID=CYSB_ECO57
Infant_1_EC_5_221
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206185..206313
DNA (129bp) protein (43aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN28541.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Uncharacterized protein YmiA n=441 Tax=Enterobacteriaceae RepID=YMIA_ECOLI
Infant_1_EC_5_222
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206316..206483
DNA (168bp) protein (56aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY62195.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Uncharacterized protein YciX n=459 Tax=Enterobacteriaceae RepID=YCIX_ECOLI
Infant_1_EC_5_223
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206597..206692
DNA (96bp) protein (32aa)
Uncharacterized protein {ECO:0000313|EMBL:EOV79834.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Uncharacterized protein n=21 Tax=Escherichia RepID=I2P4P6_ECOLX
Infant_1_EC_5_224
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206856..209531
DNA (2676bp) protein (892aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1268978 species="Bacteria; Proteobacteria; Gam
acnA; Aconitase A (EC:4.2.1.3)
Aconitate hydratase 1 n=498 Tax=Enterobacteriaceae RepID=ACON1_ECOLI
Infant_1_EC_5_225
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209595..210185)
DNA (591bp) protein (197aa)
GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=1444215 species="Bacteria; Proteo
GTP cyclohydrolase-2 n=727 Tax=Bacteria RepID=RIBA_SALCH
Infant_1_EC_5_226
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210355..211119
DNA (765bp) protein (255aa)
phosphatidylglycerophosphatase B
Phosphatidylglycerophosphatase B {ECO:0000313|EMBL:EFW52287.1}; EC=3.1.3.27 {ECO:0000313|EMBL:EFW52287.1};; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
Phosphatidylglycerophosphatase B n=456 Tax=Enterobacteriaceae RepID=PGPB_ECO57
Infant_1_EC_5_227
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211268..211576
DNA (309bp) protein (103aa)
Inner membrane protein YciS n=653 Tax=Enterobacteriaceae RepID=YCIS_ECOLI
membrane protein
Inner membrane protein yciS {ECO:0000313|EMBL:END53852.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
Infant_1_EC_5_228
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211583..212752
DNA (1170bp) protein (390aa)
hypothetical protein
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
Uncharacterized protein YciM n=653 Tax=Enterobacteriaceae RepID=YCIM_ECO57
Infant_1_EC_5_229
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212885..213682
DNA (798bp) protein (266aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=468 Tax=Bacteria RepID=PYRF_ECO57
Infant_1_EC_5_230
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213682..214008
DNA (327bp) protein (109aa)
yciH; translation initiation factor Sui1
Translation initiation factor Sui1 {ECO:0000313|EMBL:EZA35175.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
Uncharacterized protein YciH n=455 Tax=Enterobacteriaceae RepID=YCIH_ECOLI
Infant_1_EC_5_231
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214134..214352)
DNA (219bp) protein (73aa)
Osmotically-inducible lipoprotein B n=472 Tax=Enterobacteriaceae RepID=OSMB_ECO57
osmotically-inducible lipoprotein B OsmB
Osmotically-inducible lipoprotein B {ECO:0000313|EMBL:EFU34291.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
Infant_1_EC_5_232
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214621..215370)
DNA (750bp) protein (250aa)
DeoR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ELI31136.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
Uncharacterized HTH-type transcriptional regulator YciT n=468 Tax=Enterobacteriaceae RepID=YCIT_ECOLI
Infant_1_EC_5_233
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215460..215633)
DNA (174bp) protein (58aa)
hypothetical protein
UPF0509 protein YciZ {ECO:0000256|HAMAP-Rule:MF_01641}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
UPF0509 protein YciZ n=464 Tax=Enterobacteriaceae RepID=YCIZ_ECO27
Infant_1_EC_5_234
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215780..217765)
DNA (1986bp) protein (662aa)
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EII32213.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Cyclic di-GMP phosphodiesterase Gmr n=403 Tax=Enterobacteriaceae RepID=GMR_ECOLI
Infant_1_EC_5_235
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218001..219935)
DNA (1935bp) protein (645aa)
rnb; exoribonuclease II
Exoribonuclease 2 {ECO:0000256|HAMAP-Rule:MF_01036, ECO:0000256|SAAS:SAAS00050106}; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01036, ECO:0000256|SAAS:SAAS00089907};; Exoribonuclease II {ECO:0000256|HAMAP
Exoribonuclease 2 n=674 Tax=Enterobacteriaceae RepID=RNB_CITK8
Infant_1_EC_5_236
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220003..221130)
DNA (1128bp) protein (376aa)
yciW; oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:EGU97620.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
Uncharacterized protein YciW n=469 Tax=Enterobacteriaceae RepID=YCIW_ECOLI
Infant_1_EC_5_237
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221275..222063)
DNA (789bp) protein (263aa)
short-chain dehydrogenase/reductase SDR
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Entero
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI n=667 Tax=Enterobacteriaceae RepID=FABI_SALTY
Infant_1_EC_5_238
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222431..222781)
DNA (351bp) protein (117aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE08755.1}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Uncharacterized protein YcjD n=238 Tax=Enterobacteriaceae RepID=YCJD_ECOLI
Infant_1_EC_5_239
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222852..223658)
DNA (807bp) protein (269aa)
putative ATP-binding protein SapF of peptide transport system
Peptide ABC transporter, ATP-binding protein SapF {ECO:0000313|EMBL:ABV18063.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
Peptide transport system ATP-binding protein SapF n=687 Tax=Enterobacteriaceae RepID=SAPF_ECOL6
Infant_1_EC_5_240
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223660..224652)
DNA (993bp) protein (331aa)
Peptide transport system ATP-binding protein sapD
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:KEJ59884.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
Peptide transport system ATP-binding protein SapD n=690 Tax=Enterobacteriaceae RepID=SAPD_ECO57
Displaying items 211-240 of 346 in total

View Taxonomy