ggKbase home page

Infant_1_KP_39_4

Organism: Infant_1_KP

partial RP 22 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 0 / 38
Location: 3513..6062

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 883.0
  • Bit_score: 1450
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 883.0
  • Bit_score: 1447
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Enterobacteriaceae RepID=J3TF45_9ENTR similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 1340
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pantoea rodasii → Pantoea → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2550
GTGACGCTGACTGGCCCGAAAGAAGCTGAGCGTATTTATCGCGCCGGCCTGGCCTCTCTGCATGCGCGCGTTAAAGTGCGTATCACTGAATACGAAAAAGACGACAATGGTGAGTTTGTCGCGAAAACCAGCCTGAAAGACACGACCGTTGGCCGTGCCATTCTGTGGATGATCGTACCGAAAGGTCTGCCGTTCTCTATCGTGAACCAGGCGCTTGGTAAGAAAGCGATCTCCAAGATGCTGAACACCTGTTACCGTATTCTGGGTCTGAAACCGACCGTTATTTTTGCGGACCAGACGATGTACACCGGCTTTGCTTACGCAGCGCGTTCAGGTGCATCCGTTGGTATCGATGACATGGTCATCCCGGAGAAAAAATACGAAATCATCAGCGAAGCGGAAGCGGAAGTTGCTGAGATTCAGGAACAGTTCCAGTCCGGTCTGGTGACCGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCGATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCTACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACAGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTTGCGCAGGACCTGGTCGTCACTGAAGACGACTGCGGCACCCTGGAAGGCATCACCATGACGCCGGTTATCGAAGGTGGCGACGTTAAAGAGCCGCTGCGCGATCGCGTACTGGGTCGTGTGACTGCGGAAGATGTTCTGAAGCCGGGTACCGCGGATATTCTGGTTCCACGCAACACGCTGCTGCATGAGCACTGGTGTGACCTGCTGGAAGCGAACTCCGTTGACTCCGTCAAAGTGCGTTCCGTTGTATCCTGTGACACCGACTTTGGCGTCTGCGCGCACTGCTATGGTCGTGACCTGGCGCGTGGCCACCTCATCAACAAAGGTGAGGCTATCGGCGTTATCGCGGCACAGTCCATCGGTGAGCCGGGTACACAGCTGACGATGCGTACGTTCCACATCGGTGGTGCGGCATCTCGTGCGGCTGCTGAATCCAGCATCCAGGTGAAAAACAAAGGTAGCATCAAGCTCAGCAACGCGAAGTCGGTTGTGAACTCCAGTGGTAAGCTGGTTATCACTTCCCGTAATACCGAGCTGAAGCTGATCGACGAATTCGGTCGTACCAAAGAGAGCTATAAAGTACCTTACGGTGCGGTTATGGCGAAAGGCGACGGTGAGCAGGTTGCCGGCGGTGAAACCGTCGCAAACTGGGATCCGCACACCATGCCGGTTATCACCGAAGTTAGCGGTTTCATCCGTTTCACTGACATGATCGACGGCCAGACCATTACTCGTCAGACTGACGAGCTGACCGGTCTGTCTTCGCTGGTGGTTCTGGACTCTGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCAGCACTGAAAATCGTTGATGCTCAGGGCAACGACGTTCTGATCCCAGGCACTGATATGCCTGCTCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCGGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGATATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCTATCCTGGCTGAAATCAGCGGTATCATTTCCTTCGGTAAAGAAACCAAAGGGAAACGTCGCCTGGTTATCACCCCGGTAGACGGTAGCGAGCCGTACGAAGAGATGATCCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTGGAACGTGGTGATGTGGTTTCCGACGGTCCGGAAGCACCGCACGACATTCTGCGTCTGCGTGGCGTACATGCTGTGACCCGTTACATTGTTAACGAAGTCCAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAGCACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCCACCATCGAAAGCGCAGGCAGCTCCGACTTCCTCGAAGGCGAGCAGGTGGAATACTCCCGCGTCAAGATCGCGAACCGCGAACTGGAAGCGAACGGCAAAGTGGGCGCAACGTTCTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCCACCGAGTCCTTCATCTCCGCGGCATCGTTCCAGGAGACCACTCGCGTGCTGACCGAAGCAGCTGTTGCGGGCAAACGCGACGAACTGCGCGGTCTGAAAGAGAACGTCATCGTGGGTCGTCTGATCCCGGCCGGTACCGGTTATGCGTATCACCAGGATCGTATGCGCCGTCGCGCTGCTGGCGAGCTGCCGGCGGCACCGCAGGTGAGCGTGGAAGAAGCGTCTGCCAACCTGGCAGAGCTGCTGAACGCAGGTCTGGGCGGTTCTGACAACGATTAA
PROTEIN sequence
Length: 850
VTLTGPKEAERIYRAGLASLHARVKVRITEYEKDDNGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVIGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYGRDLARGHLINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANWDPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPAAPQVSVEEASANLAELLNAGLGGSDND*