ggKbase home page

OR_06272017_10m_0_2um_scaffold_1104_8

Organism: OR_06272017_10m_0_2um_Halothiobacillus_54_437

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 7202..8362

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 30.8
  • Coverage: 360.0
  • Bit_score: 160
  • Evalue 2.20e-36
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:KFZ90805.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.6
  • Coverage: 347.0
  • Bit_score: 193
  • Evalue 4.20e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 338.0
  • Bit_score: 150
  • Evalue 8.30e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus prosperus → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGCCCGCGTTAATGATTCAGCGCTGTACGACACAGATTCGCTTAACCGGAGTGCTTGCCCGCCTAATGGCCGGATGGACGATCGCCGCGTTGACCTTGGCAGGGGGGGTGGCCGCTGCCAGAGCAGATAGCGCAGCGGCGATCGCGGGTTCGGCCGTTGGTGCGGCGGTATCGGTGCAAGTGGTTCAAAAGCAAAGTTTAACCCCGAGTTTATCGGCCTATGGGCAAGTGATATTCGACCCGACCCATACGCAAAGCAGGACCACGCAAACGGGCGGGCAGGTGCGCCAAGTTTTGGTGGAAGCAGGCGAGCAGGTGCAAAAAGGGCAGCCTTTGCTTGTGCTGCAAACCGATCCTAATGCGAATTTGCTCTTTGAGCAGGCGCAATCGCAGCGGGTGGTTTTGCAGCAAGATTTAACGCAAAAGCAGTATCTTTTTGCGCGACAAATGGCCACGCATCAAGAGGTGGTGAGCGCCGAGCAAGCGCTCAAAGATGCCACGCAGCGCATTAACACCTTGCAAAAGATGGGCAGTAACCAGCCCATTCAAACCATTGTGGCCACCGAAGCGGCGTTGGTGATGACCGTGCCGGTGAGCGTAGGCAGCATGGTGGCACCGGGCGGGGCTTTGCTCACCTTATCGGCGCGGCAAGCGTTGCTGTTGCGATTTGGCATTGAACCGGAGAATGCGGCCTTAATTGAGCCGGGTACGCTCATCCATTTTCGCTCGGTTTTTGCCGCGCAAGGGGCGCACATCGCCCGCGTGATGCGGGTTGATGGGCAAATTAACCCGGCGACTCGCCTTTTGGATGTGATTGCCAAACCCGAGGCTTCCCCCGAGGCGCCCAACATAGCGTTGATTGCAGGCACCACCCTCGAAGGCCAAATTGCCCTGCCCGCGCAGCAGGGGTTAACGGTGCCCACTGACGCGGTGGTGTTGAACGCTGGCGCGCCGTTGGTGTTTAAAATCCAATCAAAATCGGCCACCACGCCCCACCCGATCGCTCGAGCGGTGCCGGTGCGCGTGCGCCTGCGGGTGGGCAATACCGCGTTAGTTGAGCCGCTGGTCGCCGGGGCATTAGAGGCGGGTGATGCCCTTGTGATTCAAGGGCAATATGCCTTGCAGGATGGTATGGCGGTGCGTTTGGTGCCGGCATCATGA
PROTEIN sequence
Length: 387
MPALMIQRCTTQIRLTGVLARLMAGWTIAALTLAGGVAAARADSAAAIAGSAVGAAVSVQVVQKQSLTPSLSAYGQVIFDPTHTQSRTTQTGGQVRQVLVEAGEQVQKGQPLLVLQTDPNANLLFEQAQSQRVVLQQDLTQKQYLFARQMATHQEVVSAEQALKDATQRINTLQKMGSNQPIQTIVATEAALVMTVPVSVGSMVAPGGALLTLSARQALLLRFGIEPENAALIEPGTLIHFRSVFAAQGAHIARVMRVDGQINPATRLLDVIAKPEASPEAPNIALIAGTTLEGQIALPAQQGLTVPTDAVVLNAGAPLVFKIQSKSATTPHPIARAVPVRVRLRVGNTALVEPLVAGALEAGDALVIQGQYALQDGMAVRLVPAS*