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OR_07102018_0_5m_Campylobacterales_41_11

In projects: OR_07102018_0_5m  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Campylobacterales  →  Epsilonproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 101-133 of 133 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_92
Genus: Sulfuricurvum (67.5%)
80 69700 bp 41.88 11.38 96.52
OR_07102018_0_5m_scaffold_771
Genus: Sulfuricurvum (72.73%)
11 10461 bp 41.82 11.39 97.65
OR_07102018_0_5m_scaffold_142
Genus: Sulfuricurvum (50%)
60 53938 bp 41.53 11.45 92.75
OR_07102018_0_5m_scaffold_83
Order: Campylobacterales (80.23%)
86 72214 bp 40.37 11.50 93.76
OR_07102018_0_5m_scaffold_8274
Species: RLO_Sulfuricurvum_43_24 (50%)
4 1601 bp 37.91 11.52 84.51
OR_07102018_0_5m_scaffold_5475
Genus: Sulfuricurvum (66.67%)
3 2085 bp 37.60 11.58 97.41
OR_07102018_0_5m_scaffold_2479
Species: Sulfuricurvum sp. MLSB (100%)
5 3774 bp 38.90 11.65 96.50
OR_07102018_0_5m_scaffold_64
Genus: Sulfuricurvum (51.09%)
92 85148 bp 40.93 11.68 93.64
OR_07102018_0_5m_scaffold_277
Order: Campylobacterales (73.08%)
26 29216 bp 39.08 11.70 91.74
OR_07102018_0_5m_scaffold_12055
Species: Sulfuricurvum kujiense (100%)
3 1267 bp 41.52 11.72 90.69
OR_07102018_0_5m_scaffold_10289
Species: RIFOXYD12_FULL_Sulfuricurvum_44_77_curated (50%)
2 1397 bp 39.01 11.92 99.43
OR_07102018_0_5m_scaffold_223
Genus: Sulfuricurvum (76%)
25 35613 bp 42.92 11.94 96.60
OR_07102018_0_5m_scaffold_318
Order: Campylobacterales (59.26%)
27 25820 bp 41.89 12.15 94.24
OR_07102018_0_5m_scaffold_4445
Order: Campylobacterales (100%)
4 2404 bp 35.98 12.17 49.79
OR_07102018_0_5m_scaffold_464
Species: Sulfurimonas gotlandica (82.35%)
17 17847 bp 42.31 12.37 99.14
OR_07102018_0_5m_scaffold_16283
Species: Sulfuricurvum kujiense (100%)
1 1053 bp 44.73 12.54 99.72
OR_07102018_0_5m_scaffold_3255
Species: RLO_Sulfuricurvum_43_24 (50%)
4 3055 bp 38.49 12.62 89.85
OR_07102018_0_5m_scaffold_2798
Order: Campylobacterales (72.73%)
11 5502 bp 34.79 12.76 66.90
OR_07102018_0_5m_scaffold_878
Order: Campylobacterales (63.64%)
11 9273 bp 36.79 13.09 79.62
OR_07102018_0_5m_scaffold_1326
Order: Campylobacterales (60%)
5 6351 bp 38.03 13.42 98.35
OR_07102018_0_5m_scaffold_115
Genus: Sulfuricurvum (51.56%)
64 64467 bp 41.84 13.49 88.26
OR_07102018_0_5m_scaffold_8312
Genus: Sulfuricurvum (66.67%)
3 1596 bp 40.35 13.82 100.19
OR_07102018_0_5m_scaffold_683
Order: Campylobacterales (60%)
10 11994 bp 38.26 14.18 90.55
OR_07102018_0_5m_scaffold_1101
Order: Campylobacterales (55.56%)
18 7506 bp 41.83 14.23 89.57
OR_07102018_0_5m_scaffold_16926
Species: RLO_Sulfurimonas_36_12 (66.67%)
3 1027 bp 38.95 14.61 85.30
OR_07102018_0_5m_scaffold_994
Order: Campylobacterales (50%)
10 10082 bp 38.53 14.63 79.54
OR_07102018_0_5m_scaffold_10902
Species: RLO_Sulfuricurvum_43_24 (100%)
2 1346 bp 40.19 14.71 86.92
OR_07102018_0_5m_scaffold_8781
Order: Campylobacterales (75%)
4 1536 bp 32.94 14.94 80.08
OR_07102018_0_5m_scaffold_1707
Order: Campylobacterales (75%)
4 5108 bp 39.12 15.21 79.52
OR_07102018_0_5m_scaffold_311
Order: Campylobacterales (92.59%)
27 26595 bp 38.91 15.22 89.60
OR_07102018_0_5m_scaffold_1638
Species: Candidatus Sulfuricurvum sp. RIFRC-1 (60%)
5 5286 bp 41.52 15.61 100.34
OR_07102018_0_5m_scaffold_10511
Species: Sulfuricurvum kujiense (50%)
2 1378 bp 41.80 15.67 101.02
OR_07102018_0_5m_scaffold_3774
Species: RLO_Sulfuricurvum_43_24 (50%)
4 2721 bp 36.90 16.21 91.18
Displaying items 101-133 of 133 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.