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OR_07102018_0_5m_Halothiobacillus_neapolitanus_54_67

In projects: OR_07102018_0_5m  |  GC_Halothiobacillus  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Halothiobacillus neapolitanus  →  Halothiobacillus  →  Chromatiales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 151-200 of 290 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07102018_0_5m_scaffold_997
Class: Gammaproteobacteria (50%)
10 8240 bp 48.58 63.86 84.98
OR_07102018_0_5m_scaffold_10448
Species: Halothiobacillus neapolitanus (100%)
3 1383 bp 53.29 63.88 90.89
OR_07102018_0_5m_scaffold_6855
Species: Halothiobacillus neapolitanus (100%)
2 1803 bp 55.30 63.89 96.17
OR_07102018_0_5m_scaffold_10497
Species: Halothiobacillus neapolitanus (100%)
1 1379 bp 54.24 63.96 93.11
OR_07102018_0_5m_scaffold_3540
Species: Halothiobacillus neapolitanus (75%)
4 2861 bp 48.65 64.23 81.16
OR_07102018_0_5m_scaffold_403
Species: Halothiobacillus neapolitanus (62.5%)
40 42168 bp 53.18 64.31 86.95
OR_07102018_0_5m_scaffold_6367
Species: Halothiobacillus neapolitanus (100%)
3 1889 bp 54.69 64.32 97.67
OR_07102018_0_5m_scaffold_1752
Species: Halothiobacillus neapolitanus (85.71%)
7 4985 bp 50.59 64.42 97.01
OR_07102018_0_5m_scaffold_4154
Species: Halothiobacillus neapolitanus (80%)
5 2529 bp 57.30 64.53 90.98
OR_07102018_0_5m_scaffold_1532
Species: Halothiobacillus neapolitanus (100%)
9 8056 bp 52.52 64.61 83.86
OR_07102018_0_5m_scaffold_14447
Species: Halothiobacillus neapolitanus (100%)
2 1135 bp 54.27 64.63 71.10
OR_07102018_0_5m_scaffold_2639
Species: Halothiobacillus neapolitanus (66.67%)
3 3572 bp 49.30 64.75 86.51
OR_07102018_0_5m_scaffold_4597
Species: Halothiobacillus neapolitanus (50%)
6 5139 bp 55.50 65.00 99.24
OR_07102018_0_5m_scaffold_2353
Species: Halothiobacillus neapolitanus (83.33%)
6 3941 bp 52.73 65.12 96.22
OR_07102018_0_5m_scaffold_10450
Species: Halothiobacillus neapolitanus (100%)
2 1383 bp 50.47 65.40 95.88
OR_07102018_0_5m_scaffold_4861
Species: Halothiobacillus neapolitanus (100%)
4 2828 bp 51.63 65.45 71.61
OR_07102018_0_5m_scaffold_1399
Species: Halothiobacillus neapolitanus (83.33%)
12 12266 bp 51.13 65.46 77.51
OR_07102018_0_5m_scaffold_5842
Species: Halothiobacillus neapolitanus (100%)
3 2003 bp 53.82 65.60 97.35
OR_07102018_0_5m_scaffold_2298
Species: Halothiobacillus neapolitanus (100%)
5 4024 bp 52.68 65.64 93.64
OR_07102018_0_5m_scaffold_6260
Species: Halothiobacillus neapolitanus (50%)
4 2392 bp 50.46 65.72 76.76
OR_07102018_0_5m_scaffold_2027
Species: Halothiobacillus neapolitanus (100%)
6 4461 bp 53.71 65.80 83.93
OR_07102018_0_5m_scaffold_2498
Species: Halothiobacillus neapolitanus (100%)
4 3741 bp 54.88 65.88 98.56
OR_07102018_0_5m_scaffold_1436
Species: Halothiobacillus neapolitanus (100%)
3 5953 bp 53.37 65.94 97.51
OR_07102018_0_5m_scaffold_8535
Species: Halothiobacillus neapolitanus (100%)
3 1567 bp 55.52 65.95 87.11
OR_07102018_0_5m_scaffold_13556
Species: Halothiobacillus neapolitanus (100%)
3 1180 bp 48.47 66.10 84.15
OR_07102018_0_5m_scaffold_1408
Species: Halothiobacillus neapolitanus (100%)
6 6018 bp 48.50 66.15 99.05
OR_07102018_0_5m_scaffold_824
Species: Halothiobacillus neapolitanus (71.43%)
14 11458 bp 54.80 66.16 91.95
OR_07102018_0_5m_scaffold_1625
Species: Halothiobacillus neapolitanus (53.33%)
15 9496 bp 55.74 66.42 88.77
OR_07102018_0_5m_scaffold_6943
Species: Halothiobacillus neapolitanus (100%)
4 1788 bp 50.11 66.53 94.97
OR_07102018_0_5m_scaffold_4712
Species: Halothiobacillus neapolitanus (100%)
3 2313 bp 55.94 66.54 96.76
OR_07102018_0_5m_scaffold_6671
Species: Halothiobacillus neapolitanus (100%)
2 1838 bp 49.46 66.59 86.67
OR_07102018_0_5m_scaffold_735
Species: Halothiobacillus neapolitanus (100%)
12 11945 bp 52.97 66.63 90.36
OR_07102018_0_5m_scaffold_701
Species: Halothiobacillus neapolitanus (75%)
16 14895 bp 53.72 66.68 95.75
OR_07102018_0_5m_scaffold_5075
Species: Halothiobacillus neapolitanus (100%)
3 2194 bp 56.61 66.80 99.41
OR_07102018_0_5m_scaffold_4138
Species: Halothiobacillus neapolitanus (66.67%)
3 2538 bp 56.38 66.84 92.44
OR_07102018_0_5m_scaffold_1304
Species: Halothiobacillus neapolitanus (100%)
6 6866 bp 54.89 66.98 89.35
OR_07102018_0_5m_scaffold_1639
Species: Halothiobacillus neapolitanus (100%)
5 5284 bp 54.50 66.99 91.07
OR_07102018_0_5m_scaffold_1930
Species: Halothiobacillus neapolitanus (100%)
4 4636 bp 55.85 67.01 90.98
OR_07102018_0_5m_scaffold_958
Species: Halothiobacillus neapolitanus (65.22%)
23 15508 bp 50.43 67.24 84.69
OR_07102018_0_5m_scaffold_1521
Species: Halothiobacillus neapolitanus (100%)
8 7046 bp 52.07 67.25 82.98
OR_07102018_0_5m_scaffold_733
Species: Halothiobacillus neapolitanus (66.67%)
18 20439 bp 56.64 67.26 92.60
OR_07102018_0_5m_scaffold_912
Species: Halothiobacillus neapolitanus (71.43%)
14 13817 bp 52.32 67.28 91.93
OR_07102018_0_5m_scaffold_334
Species: Halothiobacillus neapolitanus (75%)
24 26484 bp 52.75 67.34 92.54
OR_07102018_0_5m_scaffold_1215
Species: Halothiobacillus neapolitanus (88.24%)
17 14021 bp 53.93 67.36 95.06
OR_07102018_0_5m_scaffold_6826
Species: Halothiobacillus neapolitanus (66.67%)
3 1808 bp 48.45 67.45 77.05
OR_07102018_0_5m_scaffold_4717
Species: Halothiobacillus neapolitanus (80%)
5 3148 bp 52.48 67.47 91.49
OR_07102018_0_5m_scaffold_634
Species: Halothiobacillus neapolitanus (100%)
11 13108 bp 54.04 67.55 93.45
OR_07102018_0_5m_scaffold_6135
Species: Halothiobacillus neapolitanus (100%)
2 1935 bp 58.60 67.67 98.91
OR_07102018_0_5m_scaffold_1401
Species: Halothiobacillus neapolitanus (66.67%)
6 6044 bp 50.81 67.83 88.58
OR_07102018_0_5m_scaffold_532
Species: Halothiobacillus neapolitanus (76.19%)
42 43333 bp 50.91 67.87 91.09
Displaying items 151-200 of 290 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.