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OR_07182017_23_Bacteroidetes_38_5

In projects: OR_07182017_23  |  mine_tailing_impoundment_time_series  |  SOB_across_mines

Consensus taxonomy: Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Description

Coverage profile OK.

Displaying items 51-100 of 843 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
OR_07182017_23_scaffold_2363
Species: GWA2_Bacteroidetes_40_15_curated (100%)
1 1896 bp 39.77 4.91 99.84
OR_07182017_23_scaffold_3598
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1241 bp 43.19 5.56 99.84
OR_07182017_23_scaffold_2494
Species: Fibrella aestuarina (100%)
1 1803 bp 41.32 5.49 99.83
OR_07182017_23_scaffold_3852
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1157 bp 35.52 3.63 99.83
OR_07182017_23_scaffold_1557
Species: Haliscomenobacter hydrossis (50%)
2 2855 bp 41.72 5.04 99.82
OR_07182017_23_scaffold_4024
Species: Pedobacter kyungheensis (100%)
1 1112 bp 40.47 5.13 99.82
OR_07182017_23_scaffold_4141
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1082 bp 40.30 5.82 99.82
OR_07182017_23_scaffold_1660
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 2702 bp 38.19 5.66 99.82
OR_07182017_23_scaffold_2128
Species: Joostella marina (100%)
1 2137 bp 41.27 5.62 99.81
OR_07182017_23_scaffold_2843
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1575 bp 40.95 4.86 99.81
OR_07182017_23_scaffold_890
Order: Sphingobacteriales (50%)
4 4545 bp 38.22 4.59 99.80
OR_07182017_23_scaffold_914
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
4 4476 bp 41.40 5.63 99.80
OR_07182017_23_scaffold_3020
Species: Haliscomenobacter hydrossis (100%)
1 1476 bp 35.70 4.27 99.80
OR_07182017_23_scaffold_3254
Species: Pedobacter kyungheensis (100%)
1 1371 bp 34.35 6.46 99.78
OR_07182017_23_scaffold_2802
Species: Flavobacterium sp. EM1308 (100%)
1 1603 bp 40.24 3.09 99.75
OR_07182017_23_scaffold_3899
Species: Dyadobacter fermentans (100%)
1 1140 bp 41.14 5.26 99.74
OR_07182017_23_scaffold_1483
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (66.67%)
3 2981 bp 40.52 5.89 99.73
OR_07182017_23_scaffold_4085
Species: Pedobacter kyungheensis (100%)
1 1098 bp 39.44 5.19 99.73
OR_07182017_23_scaffold_2500
Species: Pedobacter antarcticus (100%)
2 1802 bp 39.96 3.91 99.72
OR_07182017_23_scaffold_4222
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1065 bp 33.90 4.93 99.72
OR_07182017_23_scaffold_808
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (80%)
5 4871 bp 34.18 5.88 99.71
OR_07182017_23_scaffold_1053
Phylum: Bacteroidetes (50%)
4 4017 bp 34.55 6.95 99.70
OR_07182017_23_scaffold_1614
Species: Emticicia oligotrophica (50%)
4 2778 bp 36.07 5.02 99.68
OR_07182017_23_scaffold_1931
Species: Haliscomenobacter hydrossis (50%)
2 2342 bp 39.50 4.87 99.66
OR_07182017_23_scaffold_2581
Species: Flavihumibacter solisilvae (50%)
2 1737 bp 42.20 5.01 99.65
OR_07182017_23_scaffold_2293
Species: Prevotella marshii (50%)
2 1975 bp 36.71 4.86 99.65
OR_07182017_23_scaffold_2434
Phylum: Bacteroidetes (100%)
3 1843 bp 39.77 4.80 99.62
OR_07182017_23_scaffold_1020
Order: Sphingobacteriales (66.67%)
3 4141 bp 38.76 5.40 99.61
OR_07182017_23_scaffold_2886
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
3 1551 bp 38.30 4.55 99.61
OR_07182017_23_scaffold_4452
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
1 1015 bp 36.75 3.69 99.61
OR_07182017_23_scaffold_427
Order: Sphingobacteriales (60%)
5 7971 bp 36.07 5.51 99.59
OR_07182017_23_scaffold_1960
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 2314 bp 37.68 4.93 99.57
OR_07182017_23_scaffold_1034
Species: Mucilaginibacter paludis (100%)
3 4089 bp 37.56 6.31 99.56
OR_07182017_23_scaffold_1910
Phylum: Bacteroidetes (66.67%)
3 2366 bp 37.15 5.71 99.54
OR_07182017_23_scaffold_3463
Species: Flavihumibacter sp. ZG627 (50%)
2 1284 bp 36.60 3.74 99.53
OR_07182017_23_scaffold_1011
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (50%)
4 4175 bp 40.19 6.40 99.52
OR_07182017_23_scaffold_2253
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (66.67%)
3 2005 bp 42.09 5.01 99.50
OR_07182017_23_scaffold_977
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (75%)
4 5331 bp 36.18 5.01 99.49
OR_07182017_23_scaffold_1514
Species: Flavihumibacter petaseus (50%)
2 2928 bp 38.11 4.76 99.49
OR_07182017_23_scaffold_3832
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1167 bp 36.50 3.73 99.49
OR_07182017_23_scaffold_2471
Order: Sphingobacteriales (66.67%)
3 1819 bp 40.24 5.69 99.45
OR_07182017_23_scaffold_2448
Phylum: Bacteroidetes (66.67%)
3 3626 bp 33.62 4.84 99.45
OR_07182017_23_scaffold_1850
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (66.67%)
3 2445 bp 37.30 5.15 99.39
OR_07182017_23_scaffold_3047
Species: Sphingobacterium spiritivorum (50%)
2 1458 bp 39.99 5.97 99.38
OR_07182017_23_scaffold_3619
Species: Niabella soli (50%)
2 1235 bp 37.89 2.91 99.35
OR_07182017_23_scaffold_2936
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1516 bp 39.45 5.54 99.34
OR_07182017_23_scaffold_1613
Species: Niastella koreensis (50%)
2 2783 bp 36.26 5.98 99.28
OR_07182017_23_scaffold_2289
Species: Chitinophaga pinensis (100%)
2 1977 bp 38.09 5.46 99.24
OR_07182017_23_scaffold_2647
Species: RIFOXYD2_FULL_Sphingobacteria_35_12_curated (100%)
2 1696 bp 40.04 5.04 99.23
OR_07182017_23_scaffold_973
Species: Spirosoma radiotolerans (100%)
1 4282 bp 36.03 5.18 99.21
Displaying items 51-100 of 843 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.