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OR_08142018_10m_0_1um_scaffold_1167_1

Organism: OR_08142018_10m_0_1um_Thiotrichales_46_111

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 1..1062

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 24.4
  • Coverage: 373.0
  • Bit_score: 73
  • Evalue 3.40e-10
RNase E: endoribonuclease for rRNA processing and mRNA degradation; member of the degradosome; involved in the production of similarity KEGG
DB: KEGG
  • Identity: 23.8
  • Coverage: 320.0
  • Bit_score: 68
  • Evalue 2.90e-09

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Taxonomy

Shewanella sp. YQH10 → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
CCTGCTCCGAGTAGTGCTCCACAACCTCCTAGTCGTGCGACCACAACGCAGAGCGTCTCAGCACAAACTGAAAGTTCTGAGTCTTCAGGTGGTTGGTTAAAACGCATGTGGAGCAGTATTTTTGGCGCAAAAGCAGTCGAAAACACCGAAGTAGTAGCGGCACCAACTGAAAAACGTCGTACGCGTGATGATAACAATCGTCGCGATCGCAACCGTCGTAGCCGCAACAATCGCAATACTGATAATAATGAAACGCGTGCTGATGCAACCGCGAAACCAACCGTTACTGAAAACAGTGAAACAGATAAAGCCATTGAAGGTCAAGAACGCGGCAATCGTCGTCGTGAAAGATCACCACGTCGTGAGCGTACGCCACGAGCAGAGTCGGGCAGTATTGAGCAGATTGCGGAAAAAACACAAGCCGAGATTCAATCATACAGTCGTGCTGCGATGGATCGTATCAATGCGAAAGTGGATAACGAAATTTTGGTCGCCCAACAGCAAGCCATTTTGGCGACGGTTGCACCAACAGAAGAACCACGTCGCAGTGCTCGTGCCGAACGAATGGCTCGTCCAGACCGTTGGGAACGTCAAATTGCGCTAGACCCTAATATTGATCCCGCCTTGTTAGCGGCACAAGATGCCGCTGCTGATAGCCTAATGGGTAATCGTGCACAACGTCAGGCAGTGCAACAAGAAAAAGCAAAAGAAATAGCGCCAGTAGCCCAACAGGAAACGACAATCGTCGTAGCTGAAGTGCCTGCCAATGTTGAGGTTGTGACTACTTCACCGACTTCAGAAGCGATCACAACCAGCGAACCTTCGGCCAGTTTAACTCACGAGAGCGAAAGCAACGAAATAGACGACGAAGACGCACGTGCGTTACGCATTGCTTCTGGGCAAGAAGAAGGCGCTGCCCCAAAACGTGAATATGATGATCGTCGTGGCCGTCGTAGTCCTTATCGTCGTCGTGGCCCACGCCGCCCTTCCAACGTAAGACGCGAACACAATAACGAGCAAGTTGCCGCTGAGTTTAGCGCACCAGCTCATGAGTCTCATTAA
PROTEIN sequence
Length: 354
PAPSSAPQPPSRATTTQSVSAQTESSESSGGWLKRMWSSIFGAKAVENTEVVAAPTEKRRTRDDNNRRDRNRRSRNNRNTDNNETRADATAKPTVTENSETDKAIEGQERGNRRRERSPRRERTPRAESGSIEQIAEKTQAEIQSYSRAAMDRINAKVDNEILVAQQQAILATVAPTEEPRRSARAERMARPDRWERQIALDPNIDPALLAAQDAAADSLMGNRAQRQAVQQEKAKEIAPVAQQETTIVVAEVPANVEVVTTSPTSEAITTSEPSASLTHESESNEIDDEDARALRIASGQEEGAAPKREYDDRRGRRSPYRRRGPRRPSNVRREHNNEQVAAEFSAPAHESH*