ggKbase home page

OR_08142018_2_5m_0_2um_scaffold_5

Search features with annotation key words

Displaying items 91-120 of 432 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_5_91
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


comp(105688..107010)
-----------------
DNA (1323bp)
protein (441aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953
signal recognition particle protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_92
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

107100..107831
-----------------
DNA (732bp)
protein (244aa)
alkyl hydroperoxide reductase n=1 Tax=Pedobacter agri RepID=UPI00029A0B19
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_93
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(107837..108709)
-----------------
DNA (873bp)
protein (291aa)
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI00035E858E
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RpoD subfamily RNA polymerase sigma-70 subunit
OR_08142018_2_5m_0_2um_scaffold_5_94
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

108933..109316
-----------------
DNA (384bp)
protein (128aa)
Activator of HSP90 ATPase 1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK6_NIAKG
activator of HSP90 ATPase 1 family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_95
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(109313..109930)
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AF00F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_96
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

109954..111387
-----------------
DNA (1434bp)
protein (478aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D7C47
YjgP/YjgQ family permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_97
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

111380..112102
-----------------
DNA (723bp)
protein (241aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F2189
superoxide dismutase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_98
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

112148..112558
-----------------
DNA (411bp)
protein (137aa)
osmc family protein id=3295188 bin=GWF2_Bacteroidetes_43_11 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_99
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(112555..113583)
-----------------
DNA (1029bp)
protein (343aa)
Glycosyl transferase family 2 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWT5_PEDHD
family 2 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_100
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

113672..114667
-----------------
DNA (996bp)
protein (332aa)
Cation diffusion facilitator family transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK3_NIAKG
cation diffusion facilitator family transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_101
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

114701..116071
-----------------
DNA (1371bp)
protein (457aa)
Beta-Ala-His dipeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK2_NIAKG
Beta-Ala-His dipeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_102
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

116074..116460
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374447A
heat shock protein Hsp15
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_103
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

116486..117166
-----------------
DNA (681bp)
protein (227aa)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK0_NIAKG
tRNA (Guanine37-N(1)-) methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_104
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

117279..119495
-----------------
DNA (2217bp)
protein (739aa)
Putative membrane associated hydrolase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EE86_RUNSL
membrane associated hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_105
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(119502..122642)
-----------------
DNA (3141bp)
protein (1047aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037E3807
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_106
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

122700..124040
-----------------
DNA (1341bp)
protein (447aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T198_ACIDE
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_107
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

124054..125778
-----------------
DNA (1725bp)
protein (575aa)
Adenine deaminase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7W9_9SPHI
adenine deaminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_108
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

125809..126462
-----------------
DNA (654bp)
protein (218aa)
Uracil phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI2_NIAKG
uracil phosphoribosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_109
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

126496..127500
-----------------
DNA (1005bp)
protein (335aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C371F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_110
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

127537..128325
-----------------
DNA (789bp)
protein (263aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363F5EA
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_111
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

128297..129013
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D3C73
S-adenosylmethionine-dependent methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_112
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(129046..129438)
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373436E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_113
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(129446..130816)
-----------------
DNA (1371bp)
protein (457aa)
Peptidase M28 n=1 Tax=Niabella soli DSM 19437 RepID=H1NQZ1_9SPHI
peptidase M28
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_114
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

130916..132058
-----------------
DNA (1143bp)
protein (381aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003682A84
group 1 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_115
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(132053..133078)
-----------------
DNA (1026bp)
protein (342aa)
Regulatory protein of adaptative response n=1 Tax=Cecembia lonarensis LW9 RepID=K1LD77_9BACT
Regulatory protein of adaptative response {ECO:0000313|EMBL:EKB48273.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
O-6-methylguanine DNA methyltransferase
OR_08142018_2_5m_0_2um_scaffold_5_116
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(133353..134219)
-----------------
DNA (867bp)
protein (289aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZW3_HALH1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_117
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(134284..135276)
-----------------
DNA (993bp)
protein (331aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_118
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(135401..136585)
-----------------
DNA (1185bp)
protein (395aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003613D09
Acetylornithine transaminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_119
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

136645..137187
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369EF8F
transferase hexapeptide repeat containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_5_120
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

137198..137401
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL62_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 91-120 of 432 in total

View Taxonomy