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OR_08142018_2_5m_0_2um_scaffold_16

Search features with annotation key words

Displaying items 61-90 of 298 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_16_61
unknown

Not on your lists

comp(59626..60969)
-----------------
DNA (1344bp)
protein (448aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_16_62
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60962..61540)
-----------------
DNA (579bp)
protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC9_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV96735.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
OR_08142018_2_5m_0_2um_scaffold_16_63
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(61629..63011)
-----------------
DNA (1383bp)
protein (461aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FF891
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_64
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(63014..64378)
-----------------
DNA (1365bp)
protein (455aa)
Secretion protein HlyD family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1B4_DYAFD
secretion protein HlyD family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_65
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(64368..66089)
-----------------
DNA (1722bp)
protein (574aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B510B
ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_66
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(66198..66830)
-----------------
DNA (633bp)
protein (211aa)
Carbonic anhydrase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM8_NIAKG
carbonate dehydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_67
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(66840..68390)
-----------------
DNA (1551bp)
protein (517aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036156C6
sulfate transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_68
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(68392..69147)
-----------------
DNA (756bp)
protein (252aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U9_NIAKG
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_69
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(69166..70674)
-----------------
DNA (1509bp)
protein (503aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG
GH3 auxin-responsive promoter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_70
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(70671..71468)
-----------------
DNA (798bp)
protein (266aa)
ABC transporter ATP-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A42AA
sulfate-transporting ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_71
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

71476..72450
-----------------
DNA (975bp)
protein (325aa)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Segetibacter koreensis RepID=UPI00036DA217
5,10-methylenetetrahydrofolate reductase (NAD(P))
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_72
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

72550..74538
-----------------
DNA (1989bp)
protein (663aa)
Two-component system sensor histidine kinase/response n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FQV5_9FLAO
multi-sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_73
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(74546..75319)
-----------------
DNA (774bp)
protein (258aa)
Two-component system sensor histidine kinase/response regulator, hybrid, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGA7_9BACT
histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_74
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(75329..76405)
-----------------
DNA (1077bp)
protein (359aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000361B526
hybrid two-component sensor histidine kinase/response regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_75
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(76405..78306)
-----------------
DNA (1902bp)
protein (634aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00035FDC19
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_76
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(78312..78710)
-----------------
DNA (399bp)
protein (133aa)
Histidine kinase n=1 Tax=Ruegeria mobilis F1926 RepID=R0DST3_9RHOB
integral membrane sensor hybrid histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_77
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(78727..79374)
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036F2BF4
two component transcriptional regulator, LuxR family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_78
unknown

Not on your lists

comp(79604..79819)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_16_79
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(79884..81374)
-----------------
DNA (1491bp)
protein (497aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360ABAD
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_80
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

81442..82866
-----------------
DNA (1425bp)
protein (475aa)
RNA methyltransferase, TrmA family n=1 Tax=Niabella soli DSM 19437 RepID=H1NT09_9SPHI
RNA methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_81
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

82869..83711
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377A085
rhomboid family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_82
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

83713..84636
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377492C
rhomboid family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_83
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

84636..85757
-----------------
DNA (1122bp)
protein (374aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N8_NIAKG
endonuclease/exonuclease/phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_84
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

85777..86880
-----------------
DNA (1104bp)
protein (368aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379F698
endonuclease/exonuclease/phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_85
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

86898..88403
-----------------
DNA (1506bp)
protein (502aa)
cysteinyl-tRNA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00036ED076
cysteinyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_86
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(88405..90594)
-----------------
DNA (2190bp)
protein (730aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037698BC
glutaryl-7-aminocephalosporanic-acid acylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_87
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(90639..91553)
-----------------
DNA (915bp)
protein (305aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQC1_EMTOG
Xylose isomerase domain-containing protein TIM barrel
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_88
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

91595..92068
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCK9_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_89
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(92069..93070)
-----------------
DNA (1002bp)
protein (334aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_16_90
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

93210..93551
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBB7_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 61-90 of 298 in total

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