ggKbase home page

OR_08142018_2_5m_0_2um_scaffold_44

Search features with annotation key words

Displaying items 91-120 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_44_85
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


97823..98344
-----------------
DNA (522bp)
protein (174aa)
30S ribosomal protein S5 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU88_CHIPD
30S ribosomal protein S5
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_86
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


98350..98532
-----------------
DNA (183bp)
protein (61aa)
50S ribosomal protein L30 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU89_CHIPD
50S ribosomal protein L30
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_87
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


98655..99104
-----------------
DNA (450bp)
protein (150aa)
50S ribosomal protein L15 n=1 Tax=Segetibacter koreensis RepID=UPI00037717C3
50S ribosomal protein L15
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_88
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


99180..100526
-----------------
DNA (1347bp)
protein (449aa)
preprotein translocase subunit SecY n=1 Tax=Segetibacter koreensis RepID=UPI00036612BC
protein translocase subunit secY/sec61 alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_89
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

100616..101422
-----------------
DNA (807bp)
protein (269aa)
Methionine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMD6_NIAKG
methionine aminopeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_90
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

101426..102652
-----------------
DNA (1227bp)
protein (409aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363977E
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_91
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

102734..103162
-----------------
DNA (429bp)
protein (143aa)
Putative signal transduction protein with CBS domains n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGJ1_NIAKG
putative signal transduction protein with CBS domains
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_92
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

103284..105854
-----------------
DNA (2571bp)
protein (857aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDR6_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_93
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(105953..106267)
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL57_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_94
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(106305..106637)
-----------------
DNA (333bp)
protein (111aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_95
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


106869..108761
-----------------
DNA (1893bp)
protein (631aa)
30S ribosomal protein S1 n=1 Tax=Segetibacter koreensis RepID=UPI00035FE542
RNA binding S1 domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_96
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

108905..109711
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035E7F35
outer membrane assembly lipoprotein YfiO
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_97
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

109704..110048
-----------------
DNA (345bp)
protein (115aa)
DNA-directed RNA polymerase subunit omega n=1 Tax=Segetibacter koreensis RepID=UPI000382E9B0
DNA-directed RNA polymerase subunit omega
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_98
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

110135..111061
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F8AC1
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_99
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

111058..111417
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003808869
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_100
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

111417..112109
-----------------
DNA (693bp)
protein (231aa)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC5_CHIPD
3-oxoacid CoA-transferase subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_101
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

112141..112800
-----------------
DNA (660bp)
protein (220aa)
3-oxoacid CoA-transferase, B subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRC4_CHIPD
3-oxoacid CoA-transferase subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_102
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

112875..113345
-----------------
DNA (471bp)
protein (157aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR63_CHIPD
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_103
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

113454..113813
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EB9CC
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_104
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(113826..115001)
-----------------
DNA (1176bp)
protein (392aa)
SAM-dependent methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI00036170B8
PUA domain containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_105
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

115002..115664
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827B0B
protein grpE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_106
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

115680..116849
-----------------
DNA (1170bp)
protein (390aa)
molecular chaperone DnaJ n=1 Tax=Segetibacter koreensis RepID=UPI00037F3AAD
chaperone protein dnaJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_107
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(116892..118685)
-----------------
DNA (1794bp)
protein (598aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC4_NIAKG
von Willebrand factor type A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_108
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(118630..119172)
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362FF84
hypoxanthine phosphoribosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_109
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(119175..120245)
-----------------
DNA (1071bp)
protein (357aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A6277
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_110
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(120242..120880)
-----------------
DNA (639bp)
protein (213aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003773A1F
O-methyltransferase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_111
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(120867..122321)
-----------------
DNA (1455bp)
protein (485aa)
Na+/solute symporter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPX5_CHIPD
Na+/solute symporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_112
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

122400..122939
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003677546
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_113
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(122920..123516)
-----------------
DNA (597bp)
protein (199aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D245F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_44_114
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(123540..124964)
-----------------
DNA (1425bp)
protein (475aa)
dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI000362F8B8
dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 91-120 of 138 in total

View Taxonomy