ggKbase home page

OR_08142018_2_5m_0_2um_scaffold_66

Search features with annotation key words

Displaying items 61-84 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_08142018_2_5m_0_2um_scaffold_66_61
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(73657..74187)
-----------------
DNA (531bp)
protein (177aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C4FD
rod shape-determining protein MreD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_62
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(74184..74954)
-----------------
DNA (771bp)
protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377BA49
rod shape-determining protein MreC
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_63
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(75048..76073)
-----------------
DNA (1026bp)
protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS3_NIAKG
MreB/Mrl family cell shape determining protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_64
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(76137..77423)
-----------------
DNA (1287bp)
protein (429aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F2413
phosphoribosylamine--glycine ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_65
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

77494..79002
-----------------
DNA (1509bp)
protein (503aa)
Amino acid/peptide transporter n=1 Tax=Niabella soli DSM 19437 RepID=H1NPZ8_9SPHI
peptide ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_66
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

79020..81065
-----------------
DNA (2046bp)
protein (682aa)
Oligopeptide transporter, OPT family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_67
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

81085..82884
-----------------
DNA (1800bp)
protein (600aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GU49_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_68
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

82886..84145
-----------------
DNA (1260bp)
protein (420aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0S2_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_69
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(84147..85694)
-----------------
DNA (1548bp)
protein (516aa)
Beta-lactamase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBG9_RUNSL
beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_70
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(85704..87707)
-----------------
DNA (2004bp)
protein (668aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380CF58
Pyruvate dehydrogenase (acetyl-transferring), 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_71
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(87837..88604)
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037AAAC7
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_72
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

88789..90636
-----------------
DNA (1848bp)
protein (616aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIL5_NIAKG
2-oxoacid:acceptor oxidoreductase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_73
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

90670..90924
-----------------
DNA (255bp)
protein (85aa)
Prevent-host-death family protein id=2140614 bin=GWE2_Bacteroidetes_42_39 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
prevent-host-death family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_74
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

90921..91178
-----------------
DNA (258bp)
protein (86aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4H3_DYAFD
Txe/YoeB family addiction module toxin
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:ACT94074.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
OR_08142018_2_5m_0_2um_scaffold_66_75
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(91172..91930)
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE99425.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
Uncharacterized protein id=2720759 bin=GWF1_Flavobacteria_32_7 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
OR_08142018_2_5m_0_2um_scaffold_66_76
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(91972..92757)
-----------------
DNA (786bp)
protein (262aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E382_9MICO
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_77
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

93025..94302
-----------------
DNA (1278bp)
protein (426aa)
Peptidase, M23 family n=1 Tax=Porphyromonas gingivalis F0570 RepID=U2JUS5_PORGN
Uncharacterized protein {ECO:0000313|EMBL:KGN84737.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
hypothetical protein
OR_08142018_2_5m_0_2um_scaffold_66_78
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

94321..94875
-----------------
DNA (555bp)
protein (185aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_79
unknown

Not on your lists

94945..95400
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_66_80
unknown

Not on your lists

95524..96102
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

OR_08142018_2_5m_0_2um_scaffold_66_81
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(96085..97104)
-----------------
DNA (1020bp)
protein (340aa)
Glycoside hydrolase family 43 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EUN2_EMTOG
glycoside hydrolase family 43
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_82
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

97381..98676
-----------------
DNA (1296bp)
protein (432aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN84737.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
OR_08142018_2_5m_0_2um_scaffold_66_83
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

98697..99263
-----------------
DNA (567bp)
protein (189aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
OR_08142018_2_5m_0_2um_scaffold_66_84
unknown

Not on your lists

99283..99774
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

Displaying items 61-84 of 84 in total

View Taxonomy