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PLM0_60_coex_redo_sep16_scaffold_7478_3

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1189..1854)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 216.0
  • Bit_score: 202
  • Evalue 5.20e-49
Pseudouridine synthase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDY1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 216.0
  • Bit_score: 202
  • Evalue 3.70e-49
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 209.0
  • Bit_score: 193
  • Evalue 3.70e-47

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Taxonomy

Dethiobacter alkaliphilus → Dethiobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
GTGAACGGCGAACGTCCCCCGGCGACCGGCCTGCTGATCGATCCGGACGTCGATCGCGTCACCGTCAACGGCCGCGAGGTCAAGCCGGTGACGCGGCATCGCTACATCGTCTTGAACAAACCTCTCGGCGTCATCACCACGGCGAAGGACGAGTCATCGAGGTCCACCGTGCTCGACGTCGTGGGTGACGAGGGCAAGTCGGGCCATCGCTTGTTCCCGGTCGGCCGCCTCGACGCCGACACCACGGGCCTGCTGCTGCTGACCGATGACGGCGACCTCGCTTTTCGCCTCACCCATCCGCGCTATAAGGTGGCGAAGGAATACGTCGCACTGGTCACCGGCAGCCCAAGCAAAATTGATGTCGAGACTTTGCGCAAAGGCGTGAAGCTCGATGACGGCGTTACGGCTCCAGCGGAGGTGGACGTGCTGCGCATCACGCCGGGCAGCCGCGACTCTGGAATCGCCGAGGTCCGGATCGTGATTCGTGAAGGCCGCCATCGCCAGGTTCGCCGCATGCTGCACGCGATCGGCCACAAGGTCCAGTCGCTGCAACGAGTCGGGTTCGGGCCTTTGAAGCTCGGGCGCTTGAAGGCCGGCGGGTGGAGGGTGCTGGGGGAGGCTGAGGTCGCCGCCCTTCGGCGGTCGGTACGCGGGGAGGAAAAATGA
PROTEIN sequence
Length: 222
VNGERPPATGLLIDPDVDRVTVNGREVKPVTRHRYIVLNKPLGVITTAKDESSRSTVLDVVGDEGKSGHRLFPVGRLDADTTGLLLLTDDGDLAFRLTHPRYKVAKEYVALVTGSPSKIDVETLRKGVKLDDGVTAPAEVDVLRITPGSRDSGIAEVRIVIREGRHRQVRRMLHAIGHKVQSLQRVGFGPLKLGRLKAGGWRVLGEAEVAALRRSVRGEEK*