ggKbase home page

PLM1_100_b1_sep16_scaffold_6152_4

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: 3494..3802

Top 3 Functional Annotations

Value Algorithm Source
LysM-repeat proteins and domains Tax=Caldanaerobacter subterraneus RepID=Q8R818_THETN similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 65.0
  • Bit_score: 62
  • Evalue 2.80e-07
LytE3; LysM repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 65.0
  • Bit_score: 62
  • Evalue 7.80e-08
LysM domain protein {ECO:0000313|EMBL:EEB75736.1}; LysM repeat-containing protein {ECO:0000313|EMBL:KKC29112.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 65.0
  • Bit_score: 62
  • Evalue 3.90e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldanaerobacter subterraneus → Caldanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 309
ATGCTCTGGCTAAACATTACTAATAAGTTTTTGCCGCCGCTTGAGATAGTGGCAATTTTTGAGCCTTGGCTTAGCCGTTCTGAGAGATTCAGTACATATACTTACTTCCAGCTACACCTGCTAAGCGGAATGCCCCTCGTATTGACTGTACAGGAACGTCTCAAAGCGGCTAGATTTGATCCCGGCCGCCTCGATGGCATCTTACGTCCTGAGACCCATGATGCCATCCGCTCGTTTCAGAACGCGAAAGGCTTACCAGCAACCGGGGAAATGGATGAAGCCACTTTCGCCGCCTTGGGTATCCGCTAA
PROTEIN sequence
Length: 103
MLWLNITNKFLPPLEIVAIFEPWLSRSERFSTYTYFQLHLLSGMPLVLTVQERLKAARFDPGRLDGILRPETHDAIRSFQNAKGLPATGEMDEATFAALGIR*