ggKbase home page

PLM1_100_b1_sep16_scaffold_8526_5

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: 1650..2165

Top 3 Functional Annotations

Value Algorithm Source
site-specific recombinase, phage integrase family bin=CNBR_ACIDO species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 144.0
  • Bit_score: 156
  • Evalue 2.40e-35
Marine sediment metagenome DNA, contig: S12H4_S05663 {ECO:0000313|EMBL:GAJ01758.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 145.0
  • Bit_score: 127
  • Evalue 1.70e-26
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 170.0
  • Bit_score: 118
  • Evalue 1.20e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 516
ATGAAGGAGGGAACCTTGCGAGGCAGTATCCGGACCCGCTACAAGGGCAGTTGGAACATCATCCTCGATATGGGCTATCGGCCTGATCCGGAGACAGGAAAACCGAGGCGCGTGCAGAAGTGGTACACCGTCCGTGGCACGAAACGCGATGCGGAAAAGAAACTGGCCGAGTTCCTCCACCAGGCCAACCGCAACGAACTGGTGGAGCCGACGAAGCTTACCCTGGGACAGTGGCTCGAGGAGTGGCTGGAGACCGCAATGAAGCCCCCCAACAAGCGACTCCGCTCGTATGAGACCTACAAGAGCATGATCGAGCGGCATCTGAAGCCGGCATTGGGGAGTATACACTTGCAACAACTGCAACCCACGGACTTGAAGCGCTACTACAATGCCTCGTCCCTTTCCCCGACCACCTTGGAACAACATCATGTGATTCTGCATACTCAAAATCGACACCTCATGGGCATAAAGCACGACCTTAGGCTACGTTACGCGCTTTTGTCAGCCTTGCTTTAA
PROTEIN sequence
Length: 172
MKEGTLRGSIRTRYKGSWNIILDMGYRPDPETGKPRRVQKWYTVRGTKRDAEKKLAEFLHQANRNELVEPTKLTLGQWLEEWLETAMKPPNKRLRSYETYKSMIERHLKPALGSIHLQQLQPTDLKRYYNASSLSPTTLEQHHVILHTQNRHLMGIKHDLRLRYALLSALL*