ggKbase home page

PLM1_100_b1_sep16_scaffold_8950_3

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: 1425..2990

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system protein, TadC subfamily protein Tax=Oceanicola granulosus HTCC2516 RepID=Q2CID9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 395.0
  • Bit_score: 175
  • Evalue 8.80e-41
Type II/IV secretion system protein, TadC subfamily protein {ECO:0000313|EMBL:EAR52319.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 395.0
  • Bit_score: 175
  • Evalue 1.20e-40
von Willebrand factor type A domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 333.0
  • Bit_score: 147
  • Evalue 5.60e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oceanicola granulosus → Oceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGAGTCGTCGAGTACAGAAGTACACGCTCGTGGTGAGTTACGCAGTGCTGCTCGCCTGCGTTGGCCTGGCTACTGGTCAGAATGGGTCCACGACTCGCCGCGTCACTACACCCGGCGTCGCGGCTGCCCAGGTGCAGATCAATCAAATTGAGACGTCGCAGTTTCCGAAGGTGGTCATCTTTGCGACGGTCCTCCGCGATGGTGTGCCGGTCCCTGGCCTCACGGCTACAGACTTTCGCGTCCGTGAAGACGAAGTGGATCAAGAGCCACTCACGGTCGAGCCGCAGCTGACGCCGCTCGCGGCAGTGTTGACCCTGGACACCAGCGGCTCGATGAAAAAGCGGCTGGCCGACGCGCAGACGGCGGCGAAGAGTTTCCTGACCACGCTGCAGCCCCAGGACAAAGTGCAGGTCATCCGTTTCTCGCGCGACGTGAAAACGCTCTATCCCCTCGGCGCCGACCGGGCCAAGGCTGAGGCGGCGATTCACAGCACGGTGGCGCGTGGTGACACAGCGCTGTGGGACGCGCTCTACGCCTCAGTCGAGTCGCTGCGCGAGGTGGCGGGGCGTAAGGCGATCGTACTGCTTAGCGACGGCGTGGACGACGATGGCACCGGCAAGCCGTTGAGCAAACGGACGGTCACCGACGTGCTGGCGCTGGCCCAGCAGGTCAACGTGCCAATCTATGCTATCGGCCTCGGCACCGAACTCGACGAACTCGCCTTGAAACAAGTGGCCAATGAGACAGGCGCGCTCTACTTCAATGCCGTCGAGGCGCGCGACCTCCAGCGCCTGTACGACAGTATCGGGAAGCAGCTCGCCGGGCAATACACCATCTCTTACCCGTCCGATCTGCCGGCCGACGGCTCAGAGCGCCGCGTACAGTTGAAGTTTGGCGACAGCTCCAGCACGAAATCATACCTGCCTGCCGCCACCGTGGCCGCCGCATCCGCGCGGCAGCCGGTCGCCCCTCCAGCTACGGCCAAGGCGCCCGACAAGGTCGCGCCCGTGGAGCAAGTGAAGCGCGTCACGCGTGCTGTCCGGACGGTCAAGGTCGTCAAGCCAGGGATCACTATGCCGGCAATGCAAGAAATCGTCGTGGTCCCCGCGGGAGCGGGAGATAACCCCATGGCGAGTCTGGGGCTTGCTACCGTAGGCAGTGCGAAGAAATACGACGAAGACATTCGGATTCCGCCCGATGCGAAAACCGAGAAGTTCGATGTCTACTGGATTCCGCAGCAGGGGAGGCGCCTCGCCCTGGCCAAGAACATTGTCTTTGATCAGGAACACCCTGCCTTTGAGTTCAAACTCGAAGACCATGTGGGGGTGGTCCGGCTCGGCGGCAAGGATTTGCCGAAGCCGAAAGAGATCTATCTGGCGGAGGAAGGCGCCAACCGGCAGCATGTCCGACTCTTTGCCATCCAGAAAACCGCCAATTACGGACAGGACATGCCGGTGCCACCTGGGATGTATGACCTCTATATTGACGTGGCTGGCGAGAACCGGTTGGAGCTCGTGGTGGAAAAACTCGAGGTCAAGGCCGGGAAAGTCACGGAGGTGGAGTGA
PROTEIN sequence
Length: 522
MSRRVQKYTLVVSYAVLLACVGLATGQNGSTTRRVTTPGVAAAQVQINQIETSQFPKVVIFATVLRDGVPVPGLTATDFRVREDEVDQEPLTVEPQLTPLAAVLTLDTSGSMKKRLADAQTAAKSFLTTLQPQDKVQVIRFSRDVKTLYPLGADRAKAEAAIHSTVARGDTALWDALYASVESLREVAGRKAIVLLSDGVDDDGTGKPLSKRTVTDVLALAQQVNVPIYAIGLGTELDELALKQVANETGALYFNAVEARDLQRLYDSIGKQLAGQYTISYPSDLPADGSERRVQLKFGDSSSTKSYLPAATVAAASARQPVAPPATAKAPDKVAPVEQVKRVTRAVRTVKVVKPGITMPAMQEIVVVPAGAGDNPMASLGLATVGSAKKYDEDIRIPPDAKTEKFDVYWIPQQGRRLALAKNIVFDQEHPAFEFKLEDHVGVVRLGGKDLPKPKEIYLAEEGANRQHVRLFAIQKTANYGQDMPVPPGMYDLYIDVAGENRLELVVEKLEVKAGKVTEVE*