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PLM1_100_b1_sep16_scaffold_9534_5

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: comp(3848..4216)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 122.0
  • Bit_score: 128
  • Evalue 4.00e-27
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 99.0
  • Bit_score: 76
  • Evalue 1.70e-11
DNA helicase transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 115.0
  • Bit_score: 63
  • Evalue 4.20e-08

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Taxonomy

Candidatus Entotheonella sp. TSY2 → Candidatus Entotheonella → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
TATCGGCGGTGCGCTCTACTCACGGAGCCGGCCGCCCTGGGTGCCCTGCGTCAGGAGCTGCAGGACCGTTTTGGCACACCGCCACCGGCAGTGGAACGCCTCCTGCTGGTGATCGAACTCAAACTCCTCGCCCGTCAACTCTTTCTGGAACGCATCGAACAACGTGGTCCGGAGGTCCTCCTCACCTTTCATCCACAGACGCCCATTGAGCCGCCCCACTTGCTCCAATGGTTACAAGCCACCGCACCACGTTTTCGTTTTCAATCCGAGCGTGTGGTCCGCATACCCCTGCCGCACACCACCGCCGAAGCGCGGCTGCTGCTGCTGAAAAAGCGCTTGCAACAGCTCCACGTGGGTGCTAGCATGTAA
PROTEIN sequence
Length: 123
YRRCALLTEPAALGALRQELQDRFGTPPPAVERLLLVIELKLLARQLFLERIEQRGPEVLLTFHPQTPIEPPHLLQWLQATAPRFRFQSERVVRIPLPHTTAEARLLLLKKRLQQLHVGASM*