ggKbase home page

PLM1_100_b1_sep16_scaffold_10954_3

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: comp(2001..3608)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 543.0
  • Bit_score: 749
  • Evalue 1.50e-213
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 526.0
  • Bit_score: 526
  • Evalue 7.70e-147
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 524.0
  • Bit_score: 784
  • Evalue 6.00e-224

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1608
ATGCACACATTGCGCAGTTGGATACGTCCAGGCATGCCAGGAGCAGCCGTCCTCGCCCTGCTGCTTCTGCTGGCTCAGATGGCCCAGACCCAGGCTCAACCGCGCTCCGGGGGCGAGTTGGTCATGGCTGTGCCTTCGGAGCCCCCATCGTACGATGGCCATCGTGAAGAGACTTTTGGCCTCATCCATCCGGTCGCCCCTTTTTATAGCCTGTTGCTGCGCGTCGACCCGGAGGACCCGAACAAGATCGTTGGAGACCTGGCAGAAAGTTGGACCATCTCCGACGATAAGCTGACCTACACCTTCAAGATCCGGCAGGGTGTGAAGTTCCACGATGGCAGCCCCGTGGCCGCCAGGGATGTCAAGGCCAGCTACGACAAAATTATTTTCCCGCCCGCCGGGGTGGTCAGCGACCGGCAAAGGCAATACGAGGTGATCGAGGCCGTGGACGTGCTTGACGCCGCCACCGTGCGCTTCCGCCTCAAGCGCCCCTCCGCCTCGATGCTGTCCGGTCTGGCGTCCCCCTGGAATTTTATTTACAACGCCGATCTTTTGGCCAGGGACATGCACTGGTACGAAAACAACATCATGGGCTCAGGCCCCTTCATGTTTGTCGAACACGTCCGTGGTTCCCACCTGGTCGGCAAGAAAAACCCTGCCTATTGGGACAAAGGGAAACCTTACCTGGATGGCTTCCGCGCCATCTTTATCACGGACACCGCGGCACGGATCGCCGCGGTTCGGGGTGAGCGCGCACACATCGAGTTTCGCGGCTTTGCCCCCAAACAACGAGATGAGTTAGTCAAAGCCCTGGGCGCGAAAATTACCGTCCAGGAGAGCCCGTGGGATTGCATCCTGCTCGTCGCGATGAATCATGAGAAGAAGCCTTTTGACGATAAACGAGTACGCCGGGCCTTAAGCCTCGCCCTCGATCGCTACGAGGGCTCCAAAGCACTCTCCCAGATCGCCATTGTCAAAGAAGTCGCGGGGGTGCAGGTGCCCGGCACGCCCTTTGCCACCCCCCCTGAAGCACTGTCCACCCTGGCCGGGTATCGCAAAGACGGCGAGGCGTCTCGCCAGGAGGCGCGCCGCTTGCTCAAAGATGCCGGGGCCGAAGGGCTCTCCTTTGTCCTCAAGAACCGTGGTATCCCCATGCCGTACGAGCCGATGGCCATCTGGCTTATCGACCAGTGGCGTAAGGTTGGCGTCAACGTCACACAGGAGGTGATCGAGGCCGCGGCCTATTACAAAGTCTTACGATCTGGCGAGTACGAGGTCGCTCTGGACTTCCAGTGCGGGTATATTGTGGATCCTGACCTGGACCTTTACAAATTCCTGTCCGTCGATAAAAATCCGGCAAACTATAGCCGCTACGTTGACCGGACGCTGGATGAACTCTATGAGCAACAGAGCCGCGCCAGCGACCCTGAGGAGCGCAAGAAGTACATCCGCCAGTTCGAGAAGCACTTGCTCGACGACGAAGCGCACTATCTCATGACGCTCCAATGGCATCGGATCATTCCACATAGCGCCAAAGTGCAGGGGTGGAAGATTACGCCGAGCCACTACCTGAATCAGCAGCTTGATACTGTCTGGCTGTCCGAGTAG
PROTEIN sequence
Length: 536
MHTLRSWIRPGMPGAAVLALLLLLAQMAQTQAQPRSGGELVMAVPSEPPSYDGHREETFGLIHPVAPFYSLLLRVDPEDPNKIVGDLAESWTISDDKLTYTFKIRQGVKFHDGSPVAARDVKASYDKIIFPPAGVVSDRQRQYEVIEAVDVLDAATVRFRLKRPSASMLSGLASPWNFIYNADLLARDMHWYENNIMGSGPFMFVEHVRGSHLVGKKNPAYWDKGKPYLDGFRAIFITDTAARIAAVRGERAHIEFRGFAPKQRDELVKALGAKITVQESPWDCILLVAMNHEKKPFDDKRVRRALSLALDRYEGSKALSQIAIVKEVAGVQVPGTPFATPPEALSTLAGYRKDGEASRQEARRLLKDAGAEGLSFVLKNRGIPMPYEPMAIWLIDQWRKVGVNVTQEVIEAAAYYKVLRSGEYEVALDFQCGYIVDPDLDLYKFLSVDKNPANYSRYVDRTLDELYEQQSRASDPEERKKYIRQFEKHLLDDEAHYLMTLQWHRIIPHSAKVQGWKITPSHYLNQQLDTVWLSE*