ggKbase home page

PLM1_100_b1_sep16_scaffold_11032_11

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: comp(6414..6956)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Lactobacillus equicursoris CIP 110162 RepID=K0NY04_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 180.0
  • Bit_score: 121
  • Evalue 5.20e-25
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 176.0
  • Bit_score: 185
  • Evalue 5.40e-44
RNA polymerase sigma factor RpoD (Sigma-A) (Major vegetative sigmafactor) similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 180.0
  • Bit_score: 120
  • Evalue 3.30e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Entotheonella sp. TSY2 → Candidatus Entotheonella → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
TGGATTCGCCAGGCCGTCCGCCGGGCGATCAGCGCGCAACACCGCACGATCCGGGTGCCGGAGTATGTGGTGGCGCGCCAGGCCACGCTGCGCGCCGCCGCGGACACGCTGGAGGGGCTCCATGGGCGGTCTCCCAGTCCGCAGGAACTCAGTACGGCGCTGGGCTGGACCCTGGAGGAGGTCGCGGCACTCTGCCGGGCCGGGCAGCCGATCCTGCGGCTCCAGCACCCGCGCACGGCGGACGAGGCGACGCTGCTAGAGGTCATAAAGGATGATCAGACGCTGCAGCCTGAGCAGCACCTGGCGGTGGCCCAACTCCACCACCGCCTGACGGCCTGTCTCGCGCGCCTCCCAGCCCGCGAGGCGTTCATCCTCCGCCTGCGCTATGGTCTGGAGGGGGAGGAGCCGCAAACGTTGCAAACCATTGGGGCACTGTTAGGACGGACGCGCGAACGGGTCCGCCAGTTGGAGCAGCGGGCCCTGGCGACCCTACGCCAGCCCCCGCAGCGCGCCCTGTTAGCCGATTTTGCCGACCAGGGCTGA
PROTEIN sequence
Length: 181
WIRQAVRRAISAQHRTIRVPEYVVARQATLRAAADTLEGLHGRSPSPQELSTALGWTLEEVAALCRAGQPILRLQHPRTADEATLLEVIKDDQTLQPEQHLAVAQLHHRLTACLARLPAREAFILRLRYGLEGEEPQTLQTIGALLGRTRERVRQLEQRALATLRQPPQRALLADFADQG*