ggKbase home page

PLM1_100_b1_sep16_scaffold_19675_2

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: 1272..1640

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9L0_GEODF similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 118.0
  • Bit_score: 125
  • Evalue 1.90e-26
Uncharacterized protein {ECO:0000313|EMBL:AKH39530.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 120.0
  • Bit_score: 131
  • Evalue 6.20e-28
sigma-54 interacting domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 118.0
  • Bit_score: 125
  • Evalue 5.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosomonas communis → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGCCTTATCTGCTGAGGAGGGAGTATCCCGGGAATGTGCGTGACCTCCGGCAGGTCGTGTCCCGGCTGATGGCCCGCTACGCAGGAGGCGGAACGATTACCATCGGCAGTGTGCCTCCAGAGGAACGCCCCGCTGCGGAGCAAGAGAATGCGGTTTGGTTGGATTTGAACTTCGAGAGCGTGATTCGACGGGCTGTGCTGTGCAGTGCGAGGCTCAAGGAAATCGGTCGCGCGGCCGAAGATATCGCCATTCGGATCGCCACCGACCAGGAAAGCGGGAATCTTCAGCGCGCCGCGCACCGCTTAGGGGTCACGGACCGCACCCTACAGCTCCGTTGCGCTCACCGGCGGCACATGGAGGAAAATTAG
PROTEIN sequence
Length: 123
MPYLLRREYPGNVRDLRQVVSRLMARYAGGGTITIGSVPPEERPAAEQENAVWLDLNFESVIRRAVLCSARLKEIGRAAEDIAIRIATDQESGNLQRAAHRLGVTDRTLQLRCAHRRHMEEN*