ggKbase home page

PLM1_100_b1_sep16_scaffold_32183_4

Organism: PLM1_100_b1_sep16_Tectomicrobia_59_7

near complete RP 44 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: 2308..2991

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E (GspE) bin=GWC2_Methylomirabilis_70_16 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 223.0
  • Bit_score: 242
  • Evalue 3.30e-61
type ii secretion system protein e similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 226.0
  • Bit_score: 237
  • Evalue 2.30e-60
Tax=RBG_13_WOR_2_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 227.0
  • Bit_score: 258
  • Evalue 4.80e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_WOR_2_41_10_curated → WOR-2 → Bacteria

Sequences

DNA sequence
Length: 684
TTGAATGAGGTAAATATCCTCACCAATAATATCGTGACCATCGAAGACCCCGTCGAATATCAACTGACCGGCATCAATCAGGTGGAAGTGGACACCAAAATCGGTTTGACCTTTGCGAGCGGGCTGCGGTCAATCTTACGCCAGGACGCCGACATTCTGATGGTCGGGGAAATCCGCGATGTCGAGACCGCGACCGTGGCTGTGCGCGCGGCGCTCACCGGGCAACAGCTGTTTAGCACTCTGCATACCGTCGATGCGCCAAGCGCCATCACGACCCTGGGCAACTTTGGCATTCAACCGTATTTGATTGCCAGCGCGCTCAGCGGCGTGGTCGCACAACGGTTGGTACGGCGGATCTGTCCGGCGTGTCGCCGGTGGTACACCCCCAGTCCAGCCGTGTTGCACCATTTAGGCCTTAAGCCCGATCAGCAGGAGTGGCAGTTTGCCTACGGCGTTGGCTGTGAGGCATGCTATTATACAGGGTATCTGGGGCGTACGGGTCTCTTTGAAATCTTACGTGTGAGTGAGACCTTGCGGCATCTCATCACCGCCCAGGCGAGTGAACAGGCGCTCAAAGCCGCGGCGATTCAGGAAGGGATGCACACCCTGCAGCACAGCGGGATTACCAAGGTCATCCAAGGCGTGACCACTCCACAAGAAGTCATGCGCGAGGTCTACCTTTAA
PROTEIN sequence
Length: 228
LNEVNILTNNIVTIEDPVEYQLTGINQVEVDTKIGLTFASGLRSILRQDADILMVGEIRDVETATVAVRAALTGQQLFSTLHTVDAPSAITTLGNFGIQPYLIASALSGVVAQRLVRRICPACRRWYTPSPAVLHHLGLKPDQQEWQFAYGVGCEACYYTGYLGRTGLFEILRVSETLRHLITAQASEQALKAAAIQEGMHTLQHSGITKVIQGVTTPQEVMREVYL*